Escherichia coli MS 117-3 (ID 47231) - BioProject

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Accession: PRJNA47231 ID: 47231

Escherichia coli MS 117-3

Demonstration Project Reference Genome for Human Microbiome Project

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)

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8886 additional projects are related by organism.

2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

Accession	PRJNA47231
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Escherichia coli MS 117-3[Taxonomy ID: 749539] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 117-3
Submission	Registration date: 21-May-2010 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Locus Tag Prefix	HMPREF9542

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	658
WGS master	1
SRA Experiments	1
Protein Sequences	5376
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_000164375.1	Scaffold	ADTS00000000	SAMN00189166	Escherichia coli MS 117-3

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	310

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Escherichia coli MS 117-3

Demonstration Project Reference Genome for Human Microbiome Project

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