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Accession: PRJEB26612 ID: 464233

KCMC ABAUM1

Antimicrobial resistance genes and phenotypes in Acinetobacter baumannii in Tanzania

To identify antibiotic resistance genes and predict antimicrobial resistance phenotypes from WGS data for multidrug-resistant A. More...

Accession	PRJEB26612
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Publications	Kumburu HH et al., "Using WGS to identify antibiotic resistance genes and predict antimicrobial resistance phenotypes in MDR Acinetobacter baumannii in Tanzania.", J Antimicrob Chemother, 2019 Jun 1;74(6):1484-1493
Submission	Registration date: 6-May-2018 Kilimanjaro Clinical Research Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2402
WGS master	18
Genomic DNA	10
Protein Sequences	4
Publications
PubMed	1
PMC	1
Other datasets
BioSample	18
Assembly	15

Assembly details:

Assembly level

Number of Assemblies

Contig

15
15

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_900406755.1		OVCM00000000	SAMEA4646221	KCRI-558	Acinetobacter baumannii
GCA_900406765.1		OVCL00000000	SAMEA4646220	KCRI-518B	Acinetobacter baumannii
GCA_900406725.1		OVCH00000000	SAMEA4646217	KCRI-432B	Acinetobacter baumannii
GCA_900406745.1		OVCG00000000	SAMEA4646216	KCRI-423	Acinetobacter baumannii
GCA_900406715.1		OVCI00000000	SAMEA4646215	KCRI-363	Acinetobacter baumannii
GCA_900406655.1		OVCD00000000	SAMEA4646214	KCRI-33	Acinetobacter baumannii
GCA_900406705.1		OVCB00000000	SAMEA4646213	KCRI-309C	Acinetobacter baumannii
GCA_900406665.1		OVCF00000000	SAMEA4646211	KCRI-186	Acinetobacter baumannii
GCA_900406675.1		OVBZ00000000	SAMEA4646210	KCRI-164C	Acinetobacter baumannii
GCA_900406695.1		OVCE00000000	SAMEA4646209	KCRI-123C	Acinetobacter baumannii
GCA_900406645.1		OVCA00000000	SAMEA4646208	KCRI-116	Acinetobacter baumannii
GCA_900406805.1		UEGJ00000000	SAMEA4646225	KCRI-45	Acinetobacter colistiniresistens
GCA_900406815.1		OVCN00000000	SAMEA4646222	KCRI-348C	Acinetobacter haemolyticus
GCA_900406785.1		UEFW00000000	SAMEA4646223	KCRI-35	Acinetobacter oleivorans
GCA_900406795.1		UEFT00000000	SAMEA4646224	KCRI-42	Acinetobacter soli

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KCMC ABAUM1
KCMC ABAUM1
Antimicrobial resistance genes and phenotypes in Acinetobacter baumannii in Tanzania

BioProject
TMTC2 [Colobus angolensis palliatus]
TMTC2 [Colobus angolensis palliatus]
Gene ID:105506099

Gene
Rnf39 ring finger protein 39 [Mus musculus]
Rnf39 ring finger protein 39 [Mus musculus]
Gene ID:386454

Gene
Taxonomy Links for Nucleotide (Select 1935132179) (1)
Taxonomy
PREDICTED: Rattus norvegicus ArfGAP with SH3 domain, ankyrin repeat and PH domai...
PREDICTED: Rattus norvegicus ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 (Asap1), transcript variant X9, mRNA
gi|2678957710|ref|XM_063263534.1|

Nucleotide

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