Burkholderia (ID 434393) - BioProject

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Accession: PRJNA434393 ID: 434393

Burkholderia

Multi-drug 65 strains of 8 resistant Burkholderia spp Genome sequencing and assembly

Sequence multi-drug 65 strains of 8 resistant Burkholderia spp. with the goal of discovering the mechanism of β-lactam-diazabicyclooctane (e.g., ceftazidime-avibactam and imipenem-relebactam) resistance.

Accession	PRJNA434393
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"The J. Craig Venter Institute Genome Center for Infectious Diseases" (Grant ID U19 AI110819, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 16-Feb-2018 JCVI
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	7720
WGS master	64
SRA Experiments	64
Protein Sequences	391041
Other datasets
BioSample	64
Assembly	64

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

64
64

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002980755.1	PVFJ00000000	SAMN08628013	AU11161	Burkholderia ambifaria
GCA_002981655.1	PVGI00000000	SAMN08627987	AU20319	Burkholderia ambifaria
GCA_002981275.1	PVGG00000000	SAMN08627989	AU19684	Burkholderia cenocepacia
GCA_002981045.1	PVFD00000000	SAMN08627938	AU0756	Burkholderia cenocepacia
GCA_002981785.1	PVGV00000000	SAMN08627973	AU24362	Burkholderia cenocepacia
GCA_002981225.1	PVGK00000000	SAMN08627985	AU20979	Burkholderia contaminans
GCA_002980735.1	PVFG00000000	SAMN08627953	AU10235	Burkholderia contaminans
GCA_002980975.1	PVFC00000000	SAMN08627940	AU0032	Burkholderia gladioli
GCA_002980955.1	PVFX00000000	SAMN08627999	AU16341	Burkholderia gladioli
GCA_002981405.1	PVGZ00000000	SAMN08627969	AU26456	Burkholderia gladioli
GCA_002981475.1	PVHE00000000	SAMN08627964	AU29541	Burkholderia gladioli
GCA_002981875.1	PVHI00000000	SAMN08627959	AU30473	Burkholderia gladioli
GCA_003048355.1	PZZC00000000	SAMN08848949	AU21015	Burkholderia multivorans
GCA_002981845.1	PVHB00000000	SAMN08627967	AU28069	Burkholderia multivorans
GCA_002981835.1	PVGY00000000	SAMN08627970	AU26250	Burkholderia multivorans
GCA_002981815.1	PVGX00000000	SAMN08627971	AU25543	Burkholderia multivorans
GCA_002981455.1	PVHD00000000	SAMN08627965	AU29198	Burkholderia multivorans
GCA_002981395.1	PVHA00000000	SAMN08627968	AU27706	Burkholderia multivorans
GCA_002981415.1	PVHC00000000	SAMN08627966	AU28442	Burkholderia multivorans
GCA_002981615.1	PVFY00000000	SAMN08627998	AU16734	Burkholderia multivorans
GCA_002981595.1	PVHL00000000	SAMN08627956	AU4507	Burkholderia multivorans
GCA_002981555.1	PVHJ00000000	SAMN08627958	AU30760	Burkholderia multivorans
GCA_002981535.1	PVHH00000000	SAMN08627960	AU30441	Burkholderia multivorans
GCA_002981515.1	PVHG00000000	SAMN08627961	AU30438	Burkholderia multivorans
GCA_002981485.1	PVHF00000000	SAMN08627963	AU30050	Burkholderia multivorans
GCA_002981755.1	PVGT00000000	SAMN08627975	AU23995	Burkholderia multivorans
GCA_002981775.1	PVGW00000000	SAMN08627972	AU25057	Burkholderia multivorans
GCA_002981725.1	PVGQ00000000	SAMN08627979	AU23668	Burkholderia multivorans
GCA_002981715.1	PVGP00000000	SAMN08627980	AU23365	Burkholderia multivorans
GCA_002981635.1	PVGJ00000000	SAMN08627986	AU20929	Burkholderia multivorans
GCA_002981695.1	PVGN00000000	SAMN08627982	AU22436	Burkholderia multivorans
GCA_002981675.1	PVGL00000000	SAMN08627984	AU21596	Burkholderia multivorans
GCA_002981315.1	PVGM00000000	SAMN08627983	AU21747	Burkholderia multivorans
GCA_002981375.1	PVGU00000000	SAMN08627974	AU24277	Burkholderia multivorans
GCA_002981325.1	PVGR00000000	SAMN08627977	AU23690	Burkholderia multivorans
GCA_002981295.1	PVGO00000000	SAMN08627981	AU22892	Burkholderia multivorans
GCA_002981335.1	PVGS00000000	SAMN08627976	AU23919	Burkholderia multivorans
GCA_002981255.1	PVGF00000000	SAMN08627990	AU19659	Burkholderia multivorans
GCA_002981195.1	PVGD00000000	SAMN08627992	AU19518	Burkholderia multivorans
GCA_002981215.1	PVGH00000000	SAMN08627988	AU19729	Burkholderia multivorans
GCA_002981155.1	PVGE00000000	SAMN08627991	AU19564	Burkholderia multivorans
GCA_002981145.1	PVGC00000000	SAMN08627993	AU18096	Burkholderia multivorans
GCA_002981135.1	PVFZ00000000	SAMN08627997	AU17135	Burkholderia multivorans
GCA_002981075.1	PVFO00000000	SAMN08628008	AU12481	Burkholderia multivorans
GCA_002981095.1	PVFQ00000000	SAMN08628006	AU13919	Burkholderia multivorans
GCA_002981035.1	PVFN00000000	SAMN08628009	AU11772	Burkholderia multivorans
GCA_002981015.1	PVFM00000000	SAMN08628010	AU11358	Burkholderia multivorans
GCA_002980995.1	PVGB00000000	SAMN08627995	AU17545	Burkholderia multivorans
GCA_002980905.1	PVFW00000000	SAMN08628000	AU15954	Burkholderia multivorans
GCA_002980875.1	PVFU00000000	SAMN08628002	AU14786	Burkholderia multivorans
GCA_002980895.1	PVFV00000000	SAMN08628001	AU15814	Burkholderia multivorans
GCA_002980855.1	PVFT00000000	SAMN08628003	AU14371	Burkholderia multivorans
GCA_002980825.1	PVFR00000000	SAMN08628005	AU14328	Burkholderia multivorans
GCA_002980815.1	PVFS00000000	SAMN08628004	AU14364	Burkholderia multivorans
GCA_002980775.1	PVFL00000000	SAMN08628011	AU11233	Burkholderia multivorans
GCA_002980785.1	PVFK00000000	SAMN08628012	AU11204	Burkholderia multivorans
GCA_002980935.1	PVGA00000000	SAMN08627996	AU17534	Burkholderia multivorans
GCA_002980715.1	PVFI00000000	SAMN08628014	AU10897	Burkholderia multivorans
GCA_002980695.1	PVFH00000000	SAMN08628015	AU10398	Burkholderia multivorans
GCA_002980675.1	PVFF00000000	SAMN08627936	AU10086	Burkholderia multivorans
GCA_002980655.1	PVFE00000000	SAMN08627937	AU10047	Burkholderia multivorans
GCA_002981105.1	PVFP00000000	SAMN08628007	AU12872	Burkholderia sp. AU12872
GCA_003057815.1	QBJZ00000000	SAMN08849608	AU29985	Burkholderia sp. AU29985
GCA_002981575.1	PVHK00000000	SAMN08627957	AU3578	Burkholderia vietnamiensis

SRA Data Details

Parameter	Value
Data volume, Gbases	58
Data volume, Mbytes	22500

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Burkholderia

Multi-drug 65 strains of 8 resistant Burkholderia spp Genome sequencing and assembly

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