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Accession: PRJEB22665 ID: 408105

The Ectocarpus subulatus microbiome

Cultivation and metabarcoding of bacteria associated with Ectocarpus subulatus cultures

This project aims to elucidate the culturable and unculturable bacterial microbiome of Ectocarpus subulatus (Phaeophyceae) cultures. More...

Accession	PRJEB22665
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 20-Sep-2017 STATION BIOLOGIQUE DE ROSCOFF

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	596
WGS master	10
Genomic DNA	46
SRA Experiments	7
Protein Sequences	46541
Other datasets
BioSample	17
Assembly	10

Assembly details:

Assembly level

Number of Assemblies

Scaffold

10
10

Assembly	Level	WGS	BioSample	Taxonomy
GCA_902498905.1		CABVLT000000000	SAMEA5950560	Bosea sp. EC-HK365B
GCA_902498745.1		CABVLF000000000	SAMEA5950561	Erythrobacter sp. EC-HK427
GCA_902498795.1		CABVLK000000000	SAMEA5950562	Hoeflea sp. EC-HK425
GCA_902498805.1		CABVLL000000000	SAMEA5950563	Imperialibacter sp. EC-SDR9
GCA_902498775.1		CABVLG000000000	SAMEA5950564	Marinobacter salarius
GCA_902498825.1		CABVLD000000000	SAMEA5950565	Rhizobium sp. EC-SD404
GCA_902498815.1		CABVLJ000000000	SAMEA5950566	Roseovarius sp. EC-HK134
GCA_902498755.1		CABVLE000000000	SAMEA5950567	Roseovarius sp. EC-SD190
GCA_902498765.1		CABVLI000000000	SAMEA5950569	Sphingomonas aurantiaca
GCA_902498785.1		CABVLH000000000	SAMEA5950568	Sphingomonas sp. EC-HK361

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	263

Supplemental Content

Related information

Assembly
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BioSample
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Genome
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Genomic DNA
Link to genomic DNA records
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
Related Genes
Genes related to a genome project
SRA
All related SRA Experiments
WGS master
Link to WGS master record(s)

LinkOut to external resources

2906687896: Sphingomonas sp. EC-HK361 SPHINGO361 [Integrated Microbial Genomes]
2906687896: Sphingomonas sp. EC-HK361 SPHINGO361
Integrated Microbial Genomes
2896256744: Erythrobacter sp. EC-HK427 ERY430 [Integrated Microbial Genomes]
2896256744: Erythrobacter sp. EC-HK427 ERY430
Integrated Microbial Genomes
2891149205: Hoeflea sp. EC-HK425 HOE425 [Integrated Microbial Genomes]
2891149205: Hoeflea sp. EC-HK425 HOE425
Integrated Microbial Genomes

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The Ectocarpus subulatus microbiome
The Ectocarpus subulatus microbiome
Cultivation and metabarcoding of bacteria associated with Ectocarpus subulatus cultures

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