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Accession: PRJNA340147 ID: 340147

Canis lupus familiaris (dog)

The rate of ageing-associated DNA methylation dynamics is a molecular readout of lifespan variation amongst mammalian species [Bis-PCR: dog]

See Genome Information for Canis lupus familiaris
We used buccal samples from two different dog breeds with well established differences in average lifespan to perform genome-scale identification of ageing-associated differentially methylated positions (aDMPs) in a total of 48 different dogs. More...
AccessionPRJNA340147; GEO: GSE86058
Data TypeEpigenomics
ScopeMultiisolate
OrganismCanis lupus familiaris[Taxonomy ID: 9615]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris
Publications
  • Lowe R et al., "DNA methylation clocks as a predictor for ageing and age estimation in naked mole-rats, Heterocephalus glaber.", Aging (Albany NY), 2020 Mar 3;12(5):4394-4406
  • Lowe R et al., "Ageing-associated DNA methylation dynamics are a molecular readout of lifespan variation among mammalian species.", Genome Biol, 2018 Feb 16;19(1):22
SubmissionRegistration date: 25-Aug-2016
Blizard Institute, QMUL
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments48
Publications
PubMed2
PMC2
Other datasets
BioSample48
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases6
Data volume, Mbytes3607

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    Canis lupus familiaris
    The rate of ageing-associated DNA methylation dynamics is a molecular readout of lifespan variation amongst mammalian species [Bis-PCR: dog]
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