Trichoplusia ni isolate:ovarian cell line Hi5 (ID 336361) - BioProject

Format

Choose Destination

Accession: PRJNA336361 ID: 336361

Trichoplusia ni isolate:ovarian cell line Hi5 (cabbage looper)

See Genome Information for Trichoplusia ni

Navigate Across

14 additional projects are related by organism.

We assembled the Trichoplus ni genome to establish the animal and the ovarian cell line Hi5 as a new model for studying small RNAs.

Accession	PRJNA336361
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Trichoplusia ni[Taxonomy ID: 7111] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia; Trichoplusia ni
Publications	Fu Y et al., "The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology.", Elife, 2018 Jan 29;7
Submission	Registration date: 5-Feb-2018 University of Massachusetts Medical School
Relevance	Model Organism

Project Data:

Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_003590095.1	Chromosome	NKQN00000000	29	SAMN07304761	Trichoplusia ni

Parameter	Value
Data volume, Gbases	516
Data volume, Tbytes	0.28

Related RefSeq Project

PRJNA497582 : Trichoplusia ni isolate:ovarian cell line Hi5 RefSeq Genome sequencing and assembly

Supplemental Content

GOLD: Gp0443841 [Genomes On Line Database]
GOLD: Gp0443841
Genomes On Line Database
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

Trichoplusia ni isolate:ovarian cell line Hi5
Trichoplusia ni isolate:ovarian cell line Hi5
Trichoplusia ni isolate:ovarian cell line Hi5 Genome sequencing and assembly

BioProject
rxrbb [Oreochromis niloticus]
rxrbb [Oreochromis niloticus]
Gene ID:100711502

Gene
ENSONIG00000002873 AND (alive[prop]) (1)
Gene

Your browsing activity is empty.

Activity recording is turned off.