unclassified actinobacteria and Candidatus Plankto... (ID 327031) - BioProject

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Accession: PRJNA327031 ID: 327031

unclassified actinobacteria and Candidatus Planktophila

genomes of freshwater actinobacteria of the acI lineage

Planktonic freshwater actinobacteria of the so far uncultivated acI lineage were isolated via dilution to extinction from Lake Zurich, Switzerland. Genomes of 17 isolates were sequenced.

Accession	PRJNA327031
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Neuenschwander S et al., "Microdiversification in genome-streamlined ubiquitous freshwater Actinobacteria", The ISME Journal, 2017;12(1):185-198
Submission	Registration date: 28-Jun-2016 University of Zurich
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	16
SRA Experiments	16
Protein Sequences	21050
Other datasets
BioSample	17
Assembly	16

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

16
16

Assembly	Chrs	BioSample	Isolate	Taxonomy
GCA_002288305.1	1	SAMN05296518	MMS-IIB-91	Candidatus Nanopelagicus abundans
GCA_002288005.1	1	SAMN05296519	MMS-21-160	Candidatus Nanopelagicus hibericus
GCA_002287885.2	1	SAMN05296520	MMS-21-122	Candidatus Nanopelagicus limnes
GCA_002288225.1	1	SAMN05296532	MMS-IIA-65	Candidatus Planktophila dulcis
GCA_002288045.1	1	SAMN05296522	MMS-IA-53	Candidatus Planktophila dulcis
GCA_002287965.1	1	SAMN05296530	MMS-21-155	Candidatus Planktophila dulcis
GCA_002287925.1	1	SAMN05296529	MMS-21-148	Candidatus Planktophila lacus
GCA_002288385.1	1	SAMN05296524	MMS-IIB-60	Candidatus Planktophila lacus
GCA_002288325.1	1	SAMN05296526	MMS-IIB-106	Candidatus Planktophila lacus
GCA_002288365.1	1	SAMN05296534	MMS-VB-114	Candidatus Planktophila limnetica
GCA_002288065.1	1	SAMN05296523	MMS-IA-56	Candidatus Planktophila sulfonica
GCA_002288185.1	1	SAMN05296533	MMS-IIA-15	Candidatus Planktophila vernalis
GCA_002288145.1	1	SAMN05296521	MMS-IA-105	Candidatus Planktophila versatilis
GCA_002288105.1	1	SAMN05296531	MMS-IA-79	Candidatus Planktophila versatilis
GCA_002288345.1	1	SAMN05296528	MMS-IIB-142	Candidatus Planktophila versatilis
GCA_002288265.1	1	SAMN05296525	MMS-IIB-76	Candidatus Planktophila versatilis

SRA Data Details

Parameter	Value
Data volume, Gbases	6
Data volume, Mbytes	3281

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unclassified actinobacteria and Candidatus Planktophila

genomes of freshwater actinobacteria of the acI lineage

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