Gardnerella vaginalis ATCC 14019 (ID 31473) - BioProject

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Accession: PRJNA31473 ID: 31473

Gardnerella vaginalis ATCC 14019

Reference genome for the Human Microbiome Project

See Genome Information for Gardnerella vaginalis

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

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59 additional projects are related by organism.

2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

Gardnerella vaginalis ATCC 14019. A reference genome for the Human Microbiome Project.

Accession	PRJNA31473
Data Type	Genome sequencing
Scope	Monoisolate
Organism	Gardnerella vaginalis ATCC 14019[Taxonomy ID: 525284] Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Gardnerella; Gardnerella vaginalis; Gardnerella vaginalis ATCC 14019
Publications	Yeoman CJ et al., "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential.", PLoS One, 2010 Aug 26;5(8):e12411
Submission	Registration date: 3-Nov-2010 - Baylor College of Medicine - Baylor College of Medicine, Human Genome Sequencing Center, USA, Houston
Locus Tag Prefix	HMPREF0421

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	1
SRA Experiments	3
Protein Sequences	1365
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	Chrs	BioSample	Taxonomy
GCA_000159155.2	Complete genome	1	SAMN00001462	Gardnerella vaginalis ATCC 14019

SRA Data Details

Parameter	Value
Data volume, Mbases	226
Data volume, Mbytes	560

Related RefSeq Project

PRJNA55487 : Gardnerella vaginalis ATCC 14019 RefSeq Genome

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LinkOut to external resources

GOLD: Gp0004245 [Genomes On Line Database]
GOLD: Gp0004245
Genomes On Line Database
649633046: Gardnerella vaginalis 317, ATCC 14019 [Integrated Microbial Genomes]
649633046: Gardnerella vaginalis 317, ATCC 14019
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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