U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJEB9722 ID: 295451

Hcp+ C. jejuni & C. coli study

Virulence characteristics of hcp+ Campylobacter jejuni and Campylobacter coli isolates from retail chicken

Most commercially raised poultry have campylobacters in their intestinal flora, with 87% of broiler carcasses in the UK found to be contaminated. More...
AccessionPRJEB9722
Data TypeGenome sequencing and assembly
ScopeMonoisolate
PublicationsCorcionivoschi N et al., "Virulence characteristics of hcp (+) Campylobacter jejuni and Campylobacter coli isolates from retail chicken.", Gut Pathog, 2015;7:20
SubmissionRegistration date: 12-Sep-2015
LSHTM
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)9038
WGS master52
SRA Experiments52
Publications
PubMed1
PMC1
Other datasets
BioSample52
Assembly52
Assembly details:
Assembly levelNumber of Assemblies
52
52
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001291565.1ScaffoldCYQU00000000SAMEA3487061
RC188
GCA_001291545.1ScaffoldCYRI00000000SAMEA3487074
RC382
GCA_001291525.1ScaffoldCYQJ00000000SAMEA3487049
RC105
GCA_001291725.1ScaffoldCYRJ00000000SAMEA3487075
RC383
GCA_001291705.1ScaffoldCYQV00000000SAMEA3487060
RC185
GCA_001291685.1ScaffoldCYQR00000000SAMEA3487057
RC179
GCA_001291665.1ScaffoldCYQW00000000SAMEA3487063
RC264
GCA_001291645.1ScaffoldCYQG00000000SAMEA3487045
RC039
GCA_001291625.1ScaffoldCYQS00000000SAMEA3487059
RC186
GCA_001291605.1ScaffoldCYQO00000000SAMEA3487054
RC148
GCA_001292005.1ScaffoldCYQB00000000SAMEA3487042
RC026
GCA_001291985.1ScaffoldCYQD00000000SAMEA3487043
RC037
GCA_001291945.1ScaffoldCYRS00000000SAMEA3487085
RC508
GCA_001291905.1ScaffoldCYQX00000000SAMEA3487064
RC269
GCA_001291885.1ScaffoldCYQN00000000SAMEA3487053
RC127
GCA_001291865.1ScaffoldCYQC00000000SAMEA3487041
RC023
GCA_001291845.1ScaffoldCYRK00000000SAMEA3487077
RC387
GCA_001291785.1ScaffoldCYQT00000000SAMEA3487058
RC182
GCA_001291765.1ScaffoldCYQM00000000SAMEA3487052
RC126
GCA_001291745.1ScaffoldCYRE00000000SAMEA3487070
RC285
GCA_001292465.1ScaffoldCYRC00000000SAMEA3487062
RC220
GCA_001292445.1ScaffoldCYRD00000000SAMEA3487069
RC284
GCA_001292425.1ScaffoldCYRL00000000SAMEA3487076
RC386
GCA_001292405.1ScaffoldCYPZ00000000SAMEA3487040
RC018
GCA_001292365.1ScaffoldCYQZ00000000SAMEA3487067
RC281
GCA_001292345.1ScaffoldCYQF00000000SAMEA3487046
RC043
GCA_001292325.1ScaffoldCYRP00000000SAMEA3487081
RC428
GCA_001292305.1ScaffoldCYQE00000000SAMEA3487044
RC038
GCA_001292505.1ScaffoldCXZA00000000SAMEA3487037
RC008
GCA_001292225.1ScaffoldCYQL00000000SAMEA3487051
RC116
GCA_001292165.1ScaffoldCYRO00000000SAMEA3487079
RC415
GCA_001292125.1ScaffoldCYRG00000000SAMEA3487071
RC289
GCA_001292105.1ScaffoldCYQI00000000SAMEA3487047
RC096
GCA_001292085.1ScaffoldCYRM00000000SAMEA3487078
RC430
GCA_001292065.1ScaffoldCYQK00000000SAMEA3487050
RC106
GCA_001291485.1ScaffoldCYRA00000000SAMEA3487068
RC282
GCA_001292045.1ScaffoldCYRW00000000SAMEA3487087
RC526
GCA_001292025.1ScaffoldCYQQ00000000SAMEA3487056
RC169
GCA_001292145.1ScaffoldCYRH00000000SAMEA3487073
RC317
GCA_001292205.1ScaffoldCYQA00000000SAMEA3487039
RC013
GCA_001292185.1ScaffoldCYRU00000000SAMEA3487086
RC517
GCA_001292485.1ScaffoldCYRR00000000SAMEA3487083
RC459
GCA_001292285.1ScaffoldCYQP00000000SAMEA3487055
RC168
GCA_001292265.1ScaffoldCYRF00000000SAMEA3487072
RC291
GCA_001292245.1ScaffoldCYQH00000000SAMEA3487048
RC104
GCA_001292385.1ScaffoldCYRB00000000SAMEA3487066
RC280
GCA_001291825.1ScaffoldCYPY00000000SAMEA3487038
RC009
GCA_001291965.1ScaffoldCYRV00000000SAMEA3487088
12502
GCA_001291805.1ScaffoldCYQY00000000SAMEA3487065
RC270
GCA_001291925.1ScaffoldCYRQ00000000SAMEA3487082
RC429
GCA_001291585.1ScaffoldCYRT00000000SAMEA3487084
RC507
GCA_001291505.1ScaffoldCYRN00000000SAMEA3487080
RC427
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes2263

Supplemental Content

Recent activity

  • Hcp+ C. jejuni & C. coli study
    Hcp+ C. jejuni & C. coli study
    Virulence characteristics of hcp+ Campylobacter jejuni and Campylobacter coli isolates from retail chicken
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center