See
Genome Information for Orchesella cincta
Here we present sequencing, de novo assembly and annotation of the genome of the model soil ecotoxicological organism Orchesella cincta (Hexapoda: Collembola).
| Accession | PRJNA294050 |
| Data Type | Genome sequencing and assembly |
| Scope | Multiisolate |
| Organism | Orchesella cincta[Taxonomy ID: 48709] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Entomobryoidea; Orchesellidae; Orchesellinae; Orchesella; Orchesella cincta |
| Publications | Faddeeva-Vakhrusheva A et al., "Gene Family Evolution Reflects Adaptation to Soil Environmental Stressors in the Genome of the Collembolan Orchesella cincta.", Genome Biol Evol, 2016 Jul 12;8(7):2106-17 |
| Grants | - "Development, application and validation of genomics-based monitoring tools for soil quality control" (Grant ID F08.001.03, Biotechnology based Ecologically Balanced Sustainable Industrial Consortium)
|
| Submission | Registration date: 2-Sep-2016
BE-Basic- VU Amsterdam
|
| Relevance | Environmental |
| Locus Tag Prefix | Ocin01 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 3829 |
| WGS master | 1 |
| Genomic DNA | 1 |
| SRA Experiments | 2 |
| Protein Sequences | 20260 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |