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Accession: PRJNA278931 ID: 278931

Streptococcus agalactiae

Genomic analysis reveals the molecular basis for capsule loss in the Group B Streptococcus population

See Genome Information for Streptococcus agalactiae
The human and bovine bacterial pathogen Streptococcus agalactiae (Group B Streptococcus, GBS) expresses a thick polysaccharide capsule that constitutes a major virulence factor and vaccine target. More...
AccessionPRJNA278931
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStreptococcus agalactiae[Taxonomy ID: 1311]
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus agalactiae
PublicationsRosini R et al., "Genomic analysis reveals the molecular basis for capsule loss in the group B Streptococcus population.", PLoS One, 2015;10(5):e0125985
SubmissionRegistration date: 19-May-2015
Novartis Vaccines
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4378
WGS master128
Protein Sequences259967
Publications
PubMed1
PMC1
Other datasets
BioSample128
Assembly128
Assembly details:
Assembly levelNumber of Assemblies
128
128
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001010335.1ContigLCTQ00000000SAMN03435032
DK-PW-097
GCA_001010345.1ContigLCTS00000000SAMN03435034
ES-NI-001
GCA_001010325.1ContigLCTR00000000SAMN03435033
DK-PW-162
GCA_001017845.1ContigLBKC00000000SAMN03435029
DK-PW-070
GCA_001017855.1ContigLBKB00000000SAMN03435028
DK-PW-066
GCA_001017835.1ContigLBKD00000000SAMN03435030
DK-PW-089
GCA_001018615.1ContigLBHH00000000SAMN03434995
DK-B-USS-084
GCA_001018575.1ContigLBHI00000000SAMN03434996
DK-B-USS-146
GCA_001018565.1ContigLBLL00000000SAMN03435007
BE-PW-080
GCA_001018555.1ContigLBLK00000000SAMN03435005
BE-PW-051
GCA_001018535.1ContigLBLJ00000000SAMN03435004
USS-107
GCA_001018495.1ContigLBLH00000000SAMN03435002
DK-B-USS-225
GCA_001018485.1ContigLBLI00000000SAMN03435003
IMMI_409
GCA_001018475.1ContigLBLG00000000SAMN03435015
BE-PW-130
GCA_001018455.1ContigLBLF00000000SAMN03435014
BE-PW-123
GCA_001018415.1ContigLBLE00000000SAMN03435013
BE-PW-119
GCA_001018405.1ContigLBLD00000000SAMN03435012
BE-PW-110
GCA_001018395.1ContigLBLC00000000SAMN03435011
BE-PW-108
GCA_001018375.1ContigLBLB00000000SAMN03435010
BE-PW-101
GCA_001018315.1ContigLBKZ00000000SAMN03435008
BE-PW-095
GCA_001018325.1ContigLBKY00000000SAMN03435006
BE-PW-078
GCA_001018335.1ContigLBLA00000000SAMN03435009
BE-PW-096
GCA_001018295.1ContigLBKX00000000SAMN03435027
DK-PW-060
GCA_001018245.1ContigLBKW00000000SAMN03435026
DK-PW-024
GCA_001018225.1ContigLBKU00000000SAMN03435024
DE-PW-436
GCA_001018255.1ContigLBKV00000000SAMN03435025
DK-PW-014
GCA_001018215.1ContigLBKT00000000SAMN03435023
DE-PW-435
GCA_001018175.1ContigLBKR00000000SAMN03435021
DE-NI-035
GCA_001018165.1ContigLBKS00000000SAMN03435022
DE-PW-406
GCA_001018155.1ContigLBKQ00000000SAMN03435020
DE-NI-024
GCA_001018135.1ContigLBKP00000000SAMN03435019
CZ-PW-143
GCA_001018095.1ContigLBKO00000000SAMN03435018
BG-PW-074
GCA_001018085.1ContigLBKN00000000SAMN03435017
BG-PW-056
GCA_001018065.1ContigLBKM00000000SAMN03435016
BG-PW-031
GCA_001018055.1ContigLBKL00000000SAMN03435001
DK-B-USS-215
GCA_001018015.1ContigLBKK00000000SAMN03435000
DK-B-USS-204
GCA_001017995.1ContigLBKI00000000SAMN03434998
DK-B-USS-155
GCA_001018005.1ContigLBKJ00000000SAMN03434999
DK-B-USS-196
GCA_001017975.1ContigLBKH00000000SAMN03434997
DK-B-USS-147
GCA_001017915.1ContigLBKE00000000SAMN03435031
DK-PW-092
GCA_001017935.1ContigLBKG00000000SAMN03434994
DK-B-USS-055
GCA_001017925.1ContigLBKF00000000SAMN03434993
DK-B-USS-032
GCA_001017115.1ContigLCVD00000000SAMN03435044
ES-PW-080
GCA_001017085.1ContigLDAE00000000SAMN03435110
SH0660
GCA_001017075.1ContigLDAD00000000SAMN03435109
SH0657
GCA_001017045.1ContigLCWD00000000SAMN03435063
GB-PW-067
GCA_001017035.1ContigLCWC00000000SAMN03435062
GB-PW-051
GCA_001017015.1ContigLCWE00000000SAMN03435064
GB-PW-075
GCA_001016995.1ContigLCWA00000000SAMN03435060
GB-PW-041
GCA_001016965.1ContigLCWB00000000SAMN03435061
GB-PW-049
GCA_001016955.1ContigLCVV00000000SAMN03435055
ES-PW-181
GCA_001016935.1ContigLCVU00000000SAMN03435054
ES-PW-174
GCA_001016915.1ContigLCVW00000000SAMN03435056
ES-PW-195
GCA_001016895.1ContigLCVT00000000SAMN03435053
ES-PW-160
GCA_001016875.1ContigLCVS00000000SAMN03435052
ES-PW-156
GCA_001016855.1ContigLCVQ00000000SAMN03435050
ES-PW-124
GCA_001016835.1ContigLCVP00000000SAMN03435049
ES-PW-121
GCA_001016815.1ContigLCVR00000000SAMN03435051
ES-PW-153
GCA_001016795.1ContigLCVN00000000SAMN03435047
ES-PW-088
GCA_001016775.1ContigLCVF00000000SAMN03435046
ES-PW-087
GCA_001016755.1ContigLCVO00000000SAMN03435048
ES-PW-118
GCA_001016725.1ContigLCVC00000000SAMN03435043
ES-PW-068
GCA_001016715.1ContigLCVE00000000SAMN03435045
ES-PW-085
GCA_001016695.1ContigLCUV00000000SAMN03435036
ES-NI-010
GCA_001016675.1ContigLCVA00000000SAMN03435041
ES-PW-043
GCA_001016655.1ContigLCUZ00000000SAMN03435040
ES-PW-034
GCA_001016615.1ContigLCUY00000000SAMN03435039
ES-PW-033
GCA_001016625.1ContigLCVB00000000SAMN03435042
ES-PW-063
GCA_001016595.1ContigLCUW00000000SAMN03435037
ES-PW-004
GCA_001016575.1ContigLCUX00000000SAMN03435038
ES-PW-008
GCA_001016525.1ContigLCVY00000000SAMN03435058
GB-PW-021
GCA_001016545.1ContigLCUU00000000SAMN03435035
ES-NI-003
GCA_001016515.1ContigLCVX00000000SAMN03435057
GB-PW-013
GCA_001016495.1ContigLCVZ00000000SAMN03435059
GB-PW-035
GCA_001016465.1ContigLCXA00000000SAMN03435065
GB-PW-081
GCA_001016445.1ContigLDAN00000000SAMN03435119
SH3601
GCA_001016435.1ContigLDAK00000000SAMN03435116
SH2515
GCA_001016415.1ContigLDAL00000000SAMN03435117
SH2898
GCA_001016385.1ContigLCZZ00000000SAMN03435105
SH0334
GCA_001016375.1ContigLCZX00000000SAMN03435103
ML41151
GCA_001016355.1ContigLCZY00000000SAMN03435104
SH0248
GCA_001016335.1ContigLDAP00000000SAMN03435092
379415
GCA_001016285.1ContigLDAM00000000SAMN03435118
SH3115
GCA_001016295.1ContigLDAO00000000SAMN03435120
SH3683
GCA_001016265.1ContigLDAJ00000000SAMN03435115
SH1370
GCA_001016255.1ContigLDAI00000000SAMN03435114
SH1287
GCA_001016195.1ContigLDAC00000000SAMN03435108
SH0655
GCA_001016205.1ContigLDAB00000000SAMN03435107
SH0519
GCA_001016215.1ContigLDAG00000000SAMN03435112
SH0702
GCA_001016175.1ContigLDAA00000000SAMN03435106
SH0396
GCA_001016135.1ContigLCZU00000000SAMN03435100
446329
GCA_001016115.1ContigLCZS00000000SAMN03435098
418849
GCA_001016125.1ContigLCZW00000000SAMN03435102
ML30419
GCA_001016095.1ContigLCZQ00000000SAMN03435096
408523
GCA_001016065.1ContigLCZV00000000SAMN03435101
AH20834
GCA_001016045.1ContigLCZT00000000SAMN03435099
426748
GCA_001016035.1ContigLCZR00000000SAMN03435097
418136
GCA_001016005.1ContigLCZP00000000SAMN03435095
404288
GCA_001015995.1ContigLCZO00000000SAMN03435094
384541
GCA_001015965.1ContigLCZN00000000SAMN03435093
383728
GCA_001015955.1ContigLDAF00000000SAMN03435111
SH0668
GCA_001015925.1ContigLCXZ00000000SAMN03435091
343959
GCA_001015915.1ContigLDAH00000000SAMN03435113
SH0986
GCA_001015895.1ContigLCXY00000000SAMN03435090
325662
GCA_001015875.1ContigLCXX00000000SAMN03435089
312754
GCA_001015845.1ContigLCXW00000000SAMN03435088
309185
GCA_001015835.1ContigLCXV00000000SAMN03435087
299693
GCA_001015815.1ContigLCXT00000000SAMN03435085
290183
GCA_001015775.1ContigLCXR00000000SAMN03435083
090R_799
GCA_001015765.1ContigLCXS00000000SAMN03435084
B848
GCA_001015755.1ContigLCXU00000000SAMN03435086
294206
GCA_001015735.1ContigLCXP00000000SAMN03435081
IT-PW-0094
GCA_001015695.1ContigLCXQ00000000SAMN03435082
IT-PW-055
GCA_001015685.1ContigLCXO00000000SAMN03435080
IT-PW-0085
GCA_001015675.1ContigLCXN00000000SAMN03435079
IT-PW-0070
GCA_001015655.1ContigLCXM00000000SAMN03435078
IT-PW-0063
GCA_001015615.1ContigLCXL00000000SAMN03435077
IT-PW-0059
GCA_001015595.1ContigLCXJ00000000SAMN03435075
IT-NI-025
GCA_001015605.1ContigLCXK00000000SAMN03435076
IT-PW-0057
GCA_001015575.1ContigLCZL00000000SAMN03435073
IT-NI-001
GCA_001015555.1ContigLCXI00000000SAMN03435074
IT-NI-023
GCA_001015525.1ContigLCXH00000000SAMN03435072
GB-PW-110
GCA_001015505.1ContigLCXD00000000SAMN03435068
GB-PW-091
GCA_001015495.1ContigLCXG00000000SAMN03435071
GB-PW-106
GCA_001015445.1ContigLCXC00000000SAMN03435067
GB-PW-088
GCA_001015415.1ContigLCXB00000000SAMN03435066
GB-PW-087
GCA_001015425.1ContigLCXE00000000SAMN03435069
GB-PW-094
GCA_001015435.1ContigLCXF00000000SAMN03435070
GB-PW-097

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    Streptococcus agalactiae
    Genomic analysis reveals the molecular basis for capsule loss in the Group B Streptococcus population
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