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Accession: PRJNA261513 ID: 261513

Nicotiana attenuata

Transcriptome analysis of wild tobacco Nicotiana attenuata after Alternaria alternata infection

See Genome Information for Nicotiana attenuata
To understand the transcriptome changes of source-sink transition leaves after infection of Alternaria alternata at 1 dpi Overall design: mRNA profiles of source-sink stransition leaves at 1 dpi/ mock 1 d were generated by deep sequencing, using Illumina Hiseq2000.
AccessionPRJNA261513; GEO: GSE61574
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismNicotiana attenuata[Taxonomy ID: 49451]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana; Nicotiana attenuata
SubmissionRegistration date: 19-Sep-2014
Kunming institute of Botany, the Chinese Academy of Sciences
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes6
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes6435

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    Transcriptome analysis of wild tobacco Nicotiana attenuata after Alternaria alternata infection
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