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Accession: PRJNA234389 ID: 234389

Manihot

Cassava WGS sequencing

WGS sequence of fragment libraries generated from multiple cassava (Manihot) species and accessions Genome sequencing
AccessionPRJNA234389
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismManihot[Taxonomy ID: 3982]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
PublicationsDaniell H et al., "The complete nucleotide sequence of the cassava (Manihot esculenta) chloroplast genome and the evolution of atpF in Malpighiales: RNA editing and multiple losses of a group II intron.", Theor Appl Genet, 2008 Mar;116(5):723-37
SubmissionRegistration date: 7-Jun-2016
DOE-Joint Genome Institute
RelevanceAgricultural
Locus Tag PrefixMANES
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)121
WGS master1
SRA Experiments199
Protein Sequences59151
Publications
PubMed1
PMC1
Other datasets
BioSample67
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_001659605.2ChromosomeLTYI00000000
18
SAMN04116956
Manihot esculenta
SRA Data Details
ParameterValue
Data volume, Gbases4,177
Data volume, Tbytes2.61
Related Project Category: RefseqGenbank
PRJNA394209 : Manihot esculenta RefSeq Genome sequencing

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    Cassava WGS sequencing
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