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Accession: PRJNA221548 ID: 221548

Esox lucius (northern pike)

Esox lucius Genome sequencing and assembly

See Genome Information for Esox lucius
The pike (Esox lucius) is a northern hemisphere, circumpolar, fresh water species that is typically the top predator in many lakes. More...
AccessionPRJNA221548
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEsox lucius[Taxonomy ID: 8010]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox; Esox lucius
PublicationsRondeau EB et al., "The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei.", PLoS One, 2014;9(7):e102089
Grants
  • "Evolution of Salmonids" (Grant ID NSERC, NSERC)
SubmissionRegistration date: 26-Jun-2014
- University of Victoria
- Ben F Koop, Jong S Leong
RelevanceEnvironmental and Evolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)38750
WGS master2
TSA master1
Transcript38696
SRA Experiments19
Publications
PubMed1
PMC1
Other datasets
BioSample16
GEO DataSets1
Assembly2
Genome assemblies, organelles and plasmids:
Assembly GCA_000721915.3 :
NameRefSeqGenBank
Linkage group NC_025968.3CM002826.3
Linkage group NC_025969.3CM002827.3
Linkage group NC_025970.3CM002828.3
Linkage group NC_025971.3CM002829.3
Linkage group NC_025972.3CM002830.3
Linkage group NC_025973.3CM002831.3
Linkage group NC_025974.3CM002832.3
Linkage group NC_025975.3CM002833.3
Linkage group NC_025976.3CM002834.3
Linkage group NC_025977.3CM002835.3
Linkage group NC_025978.3CM002836.3
Linkage group NC_025979.3CM002837.3
Linkage group NC_025980.3CM002838.3
Linkage group NC_025981.3CM002839.3
Linkage group NC_025982.3CM002840.3
Linkage group NC_025983.3CM002841.3
Linkage group NC_025984.3CM002842.3
Linkage group NC_025985.3CM002843.3
Linkage group NC_025986.3CM002844.3
Linkage group NC_025987.3CM002845.3
Linkage group NC_025988.3CM002846.3
Linkage group NC_025989.3CM002847.3
Linkage group NC_025990.3CM002848.3
Linkage group NC_025991.3CM002849.3
Linkage group NC_025992.3CM002850.3
Whole Genome Shotgun AssemblyAZJR00000000
Assembly GCA_004634155.1 :
NameRefSeqGenBank
Mitochondrion NC_004593.1CM015599.1
Linkage group NC_025968.4CM015574.1
Linkage group NC_025969.4CM015575.1
Linkage group NC_025970.4CM015576.1
Linkage group NC_025971.4CM015577.1
Linkage group NC_025972.4CM015578.1
Linkage group NC_025973.4CM015579.1
Linkage group NC_025974.4CM015580.1
Linkage group NC_025975.4CM015581.1
Linkage group NC_025976.4CM015582.1
Linkage group NC_025977.4CM015583.1
Linkage group NC_025978.4CM015584.1
Linkage group NC_025979.4CM015585.1
Linkage group NC_025980.4CM015586.1
Linkage group NC_025981.4CM015587.1
Linkage group NC_025982.4CM015588.1
Linkage group NC_025983.4CM015589.1
Linkage group NC_025984.4CM015590.1
Linkage group NC_025985.4CM015591.1
Linkage group NC_025986.4CM015592.1
Linkage group NC_025987.4CM015593.1
Linkage group NC_025988.4CM015594.1
Linkage group NC_025989.4CM015595.1
Linkage group NC_025990.4CM015596.1
Linkage group NC_025991.4CM015597.1
Linkage group NC_025992.4CM015598.1
Whole Genome Shotgun AssemblySAXP00000000
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases829
Data volume, Tbytes0.50
Related RefSeq Project
PRJNA268215 : Esox lucius isolate:eluc_v1 RefSeq Genome sequencing

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