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Accession: PRJEB2131 ID: 203951

Malawi pneumococcal genomic snapshot

For further information on this study please see http://www.sanger.ac.uk/resources/downloads/bacteria/streptococcus-pneumoniae. More...
AccessionPRJEB2131
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 21-May-2013
Wellcome Sanger Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3922
WGS master49
SRA Experiments208
Protein Sequences100574
Other datasets
BioSample192
Assembly49
Assembly details:
Assembly levelNumber of Assemblies
48
1
49
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_900052025.1ScaffoldFIXQ00000000SAMEA867913
B14721
GCA_900058795.1ScaffoldFIXK00000000SAMEA867762
D38094X
GCA_900051305.1ScaffoldFIVO00000000SAMEA867806
A28816
GCA_900052885.1ContigFIWK00000000SAMEA867950
D28531
GCA_900048885.1ScaffoldFIVX00000000SAMEA867802
A29943
GCA_900051635.1ScaffoldFIXV00000000SAMEA867800
A29101
GCA_900051625.1ScaffoldFIXT00000000SAMEA867766
C14560X
GCA_900050465.1ScaffoldFIUI00000000SAMEA867944
C14249
GCA_900053255.1ScaffoldFIVV00000000SAMEA867793
B16221X
GCA_900053295.1ScaffoldFIXB00000000SAMEA867881
A33308
GCA_900055915.1ScaffoldFIUO00000000SAMEA867917
C13215X
GCA_900053905.1ScaffoldFIYP00000000SAMEA867785
A34562
GCA_900063725.1ScaffoldFIVW00000000SAMEA867777
D31621X
GCA_900054625.1ScaffoldFIYG00000000SAMEA867916
C15085X
GCA_900056895.1ScaffoldFIUW00000000SAMEA867834
B17333
GCA_900055245.1ScaffoldFIYV00000000SAMEA867799
A30277
GCA_900049215.1ScaffoldFIWF00000000SAMEA867807
A28640
GCA_900055565.1ScaffoldFIYC00000000SAMEA867924
D33275
GCA_900055255.1ScaffoldFIYW00000000SAMEA867771
A34292
GCA_900061925.1ScaffoldFIVL00000000SAMEA867923
C16000X
GCA_900052045.1ScaffoldFIZA00000000SAMEA867854
B10027
GCA_900054135.1ScaffoldFIWP00000000SAMEA867926
D30625
GCA_900049735.1ScaffoldFIXM00000000SAMEA867763
C14376X
GCA_900063735.1ScaffoldFIWS00000000SAMEA867852
B10622
GCA_900052565.1ScaffoldFIVC00000000SAMEA867911
B14935
GCA_900048875.1ScaffoldFIUP00000000SAMEA867918
C13181X
GCA_900052615.1ScaffoldFIXF00000000SAMEA867770
D26316X
GCA_900053285.1ScaffoldFIWX00000000SAMEA867878
D28166
GCA_900052595.1ScaffoldFIWW00000000SAMEA867909
B15188
GCA_900058545.1ScaffoldFIYY00000000SAMEA867882
A33813
GCA_900063745.1ScaffoldFIXL00000000SAMEA867877
D24847
GCA_900050505.1ScaffoldFIWA00000000SAMEA867768
D25696X
GCA_900054615.1ScaffoldFIWR00000000SAMEA867908
B15249
GCA_900050925.1ScaffoldFIVJ00000000SAMEA867780
A34030
GCA_900049715.1ScaffoldFIVR00000000SAMEA867837
B16827
GCA_900053845.1ScaffoldFIWM00000000SAMEA867795
B17731X
GCA_900052575.1ScaffoldFIXA00000000SAMEA867925
D30716
GCA_900063685.1ScaffoldFIUE00000000SAMEA867948
C11020
GCA_900055935.1ScaffoldFIYO00000000SAMEA867841
B15901
GCA_900049205.1ScaffoldFIWV00000000SAMEA867836
B16392
GCA_900057095.1ScaffoldFIYK00000000SAMEA867905
D38023
GCA_900056905.1ScaffoldFIYX00000000SAMEA867803
A29167
GCA_900051605.1ScaffoldFIVT00000000SAMEA867798
A31131
GCA_900065845.1ScaffoldFIVS00000000SAMEA867801
A29037
GCA_900050485.1ScaffoldFIUM00000000SAMEA867765
C14099X
GCA_900061915.1ScaffoldFIVE00000000SAMEA867781
A33973
GCA_900053875.1ScaffoldFIYE00000000SAMEA867930
D36051
GCA_900054635.1ScaffoldFIYL00000000SAMEA867906
C14215
GCA_900063675.1ScaffoldFIVM00000000SAMEA867783
A34045
SRA Data Details
ParameterValue
Data volume, Gbases46
Data volume, Mbytes27320

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