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Accession: PRJNA189185 ID: 189185

Vitis vinifera (wine grape)

Transcriptional responses to water deficit and Xylella fastidiosa (Pierce's disease) in Vitis vinifera

See Genome Information for Vitis vinifera
Pierce’s disease, caused by the bacterium Xylella fastidiosa, is one of the most devastating diseases of cultivated grapes. To test the long-standing hypothesis that Pierce’s disease results from pathogen-induced drought stress, we used the Affymetrix Vitis GeneChip to compare the transcriptional response of Vitis vinifera to Xylella infection, water deficit, or a combination of the two stresses. The results reveal a massive redirection of gene transcription involving 822 genes with a minimum 2-fold change (p<0.05), including the upregulation of transcripts for phenylpropanoid and flavonoid biosynthesis, pathogenesis related (PR) proteins, absisic acid (ABA)/jasmonic acid (JA)-responsive transcripts, and down-regulation of transcripts related to photosynthesis, growth and nutrition. Although the transcriptional response of plants to Xylella infection was largely distinct from the response of healthy plants to water stress, we find that 138 of the pathogen-induced genes exhibited a significantly stronger transcriptional response when plants were simultaneously exposed to infection and drought stress, suggesting a strong interaction between disease and water deficit. This interaction between drought stress and disease was mirrored in planta at the physiological level for aspects of water relations and photosynthesis, and in terms of the severity of disease symptoms and the extent of pathogen colonization, providing a molecular correlation of the classical concept of the disease triangle where environment impacts disease severity. Overall design: Mature leaves were sampled from 2-year old V. vinifera cv. Cabernet sauvignon clone 8 vines 4 and 8 weeks post-mock or inoculation with Xylella fastidiosa (Pierce's disease). Vines were grown in growth chambers under non-water limiting and water limiting condtions (moderate and severe water stress)
AccessionPRJNA189185; GEO: GSE44213
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismVitis vinifera[Taxonomy ID: 29760]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera
PublicationsChoi HK et al., "Water deficit modulates the response of Vitis vinifera to the Pierce's disease pathogen Xylella fastidiosa.", Mol Plant Microbe Interact, 2013 Jun;26(6):643-57
SubmissionRegistration date: 11-Feb-2013
University of California-Davis
RelevanceAgricultural
Project Data:
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PubMed1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots739620
Data volume, Processed Mbytes12
Data volume, Supplementary Mbytes158

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    Transcriptional responses to water deficit and Xylella fastidiosa (Pierce's disease) in Vitis vinifera
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