Navigate Up
Navigate Across
The green and black poison dart frog (Dendrobates auratus) is a brightly-colored member of the order Anura native to southern Central America and Colombia. This sample is from a female juvenile individual, the first offspring of individuals aDenAur2 (mother) and aDenAur3 (father), derived from populations at the Costa Rican Amphibian Research Center in the Guayacan Rainforest and bred in the Burmeister lab at the University of North Carolina at Chapel Hill. It was procured by Sabrina Burmeister to generate a high-quality reference genome for the Genomes Project (VGP). Sequencing and genome curation were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco. Sabrina Burmeister conducted genome assembly.
| Accession | PRJNA1125376 |
| Type | Umbrella project |
| Organism | Dendrobates auratus[Taxonomy ID: 43471] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Dendrobatidae; Dendrobatinae; Dendrobates; Dendrobates auratus |
| Submission | Registration date: 18-Jun-2024
Vertebrate Genomes Project |
| Relevance | Reference Genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 16 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 4 |
This project encompasses the following 5 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : SRA or Trace No data links Total |
3
2
5
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA1106996 | No data links | Dendrobates auratus | Dendrobates auratus (green and black poison frog) genome, aDenAur1, maternal haplotype (Vertebrate Genomes Project) | | PRJNA1106997 | No data links | Dendrobates auratus | Dendrobates auratus (green and black poison frog) genome, aDenAur1, paternal haplotype (Vertebrate Genomes Project) | | PRJNA1127675 | SRA or Trace | Dendrobates auratus (green and black poison frog) transcriptome, aDenAur2 | Dendrobates auratus (green and black poison frog) transcriptome, aDenAur2 (Vertebrate Genomes Project) | | PRJNA1127676 | SRA or Trace | Dendrobates auratus (green and black poison frog) transcriptome, aDenAur3 | Dendrobates auratus (green and black poison frog) transcriptome, aDenAur3 (Vertebrate Genomes Project) | | PRJNA1127677 | SRA or Trace | Dendrobates auratus (green and black poison frog) transcriptome, aDenAur4 | Dendrobates auratus (green and black poison frog) transcriptome, aDenAur4 (Vertebrate Genomes Project) |
|