ID 1122109 - BioProject

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Accession: PRJNA1122109 ID: 1122109

Pectobacterium and Dickeya species that have been isolated in the Netherlands 1997-2020

To study the diversity of Pectobacterium and Dickeya isolates that have been collected from symptomatic plants in the Netherlands (field, greenhouse, import) a selection of the NIVIP bacterial collection was sequenced. Also some type-strains (from public collections) were included.

Accession	PRJNA1122109
Data Type	Genome sequencing
Scope	Multispecies
Submission	Registration date: 10-Jun-2024 NIVIP
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	35
Other datasets
BioSample	35
Assembly	35

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

35
35

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_040225205.1	JBEHFJ000000000	SAMN41774398	PD 7900	Pectobacterium actinidiae
GCA_040225175.1	JBEHFB000000000	SAMN41774390	PD 7231	Pectobacterium aroidearum
GCA_040225335.1	JBEHEX000000000	SAMN41774386	PD 6997	Pectobacterium aroidearum
GCA_040224615.1	JBEHER000000000	SAMN41774380	PD 6523	Pectobacterium aroidearum
GCA_040224595.1	JBEHFC000000000	SAMN41774391	PD 7232	Pectobacterium aroidearum
GCA_040224515.1	JBEHFF000000000	SAMN41774394	PD 7271	Pectobacterium aroidearum
GCA_040224475.1	JBEHFE000000000	SAMN41774393	PD 7236	Pectobacterium aroidearum
GCA_040224395.1	JBEHEK000000000	SAMN41774373	LMG 2417	Pectobacterium aroidearum
GCA_040224315.1	JBEHED000000000	SAMN41774366	PD 8605	Pectobacterium aroidearum
GCA_040224275.1	JBEHEH000000000	SAMN41774370	PD 8609	Pectobacterium aroidearum
GCA_040285185.1	JBEHEV000000000	SAMN41774384	PD 6993	Pectobacterium aroidearum
GCA_040224195.1	JBEHEI000000000	SAMN41774371	PD 8610	Pectobacterium brasiliense
GCA_040224535.1	JBEHEZ000000000	SAMN41774388	PD 7081	Pectobacterium brasiliense
GCA_040225295.1	JBEHEJ000000000	SAMN41774372	PD 8611	Pectobacterium brasiliense
GCA_040225265.1	JBEHEY000000000	SAMN41774387	PD 7079	Pectobacterium brasiliense
GCA_040225255.1	JBEHET000000000	SAMN41774382	PD 6952	Pectobacterium brasiliense
GCA_040225375.1	JBEHEP000000000	SAMN41774378	PD 5190	Pectobacterium brasiliense
GCA_040224415.1	JBEHEL000000000	SAMN41774374	LMG 17936	Pectobacterium cacticida
GCA_040225055.1	JBEHEC000000000	SAMN41774365	PD 8604	Pectobacterium carotovorum
GCA_040225075.1	JBEHFG000000000	SAMN41774395	PD 7434	Pectobacterium jejuense
GCA_040225195.1	JBEHEU000000000	SAMN41774383	PD 6958	Pectobacterium odoriferum
GCA_040224555.1	JBEHES000000000	SAMN41774381	PD 6860	Pectobacterium odoriferum
GCA_040224355.1	JBEHEE000000000	SAMN41774367	PD 8606	Pectobacterium odoriferum
GCA_040224375.1	JBEHEM000000000	SAMN41774375	LMG 29774	Pectobacterium parmentieri
GCA_040224495.1	JBEHEQ000000000	SAMN41774379	PD 5801	Pectobacterium parmentieri
GCA_040224335.1	JBEHEN000000000	SAMN41774376	LMG 30828	Pectobacterium parvum
GCA_040225315.1	JBEHFD000000000	SAMN41774392	PD 7233	Pectobacterium polaris
GCA_040225135.1	JBEHEB000000000	SAMN41774364	DSM 105255	Pectobacterium polaris
GCA_040224295.1	JBEHEF000000000	SAMN41774368	PD 8607	Pectobacterium polonicum
GCA_040224575.1	JBEHEO000000000	SAMN41774377	PD 5156	Pectobacterium punjabense
GCA_040225235.1	JBEHEW000000000	SAMN41774385	PD 6994	Pectobacterium versatile
GCA_040225155.1	JBEHFH000000000	SAMN41774396	PD 7537	Pectobacterium versatile
GCA_040225115.1	JBEHFI000000000	SAMN41774397	PD 7836	Pectobacterium versatile
GCA_040224435.1	JBEHEG000000000	SAMN41774369	PD 8608	Pectobacterium versatile
GCA_040224455.1	JBEHFA000000000	SAMN41774389	PD 7096	Pectobacterium zantedeschiae

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Pectobacterium and Dickeya species that have been isolated in the Netherlands 1997-2020

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