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Accession: PRJNA1120109 ID: 1120109

Campylobacter from domestic ducks

Campylobacter coli and Campylobacter jejuni from domestic ducks
AccessionPRJNA1120109
Data TypeGenome sequencing
ScopeMultispecies
Grants
  • "Intervention Strategies to Control Salmonella and Campylobacter During Poultry Processing" (Grant ID 6040-32000-085-000-D, USDA Agricultural Research Service)
SubmissionRegistration date: 4-Jun-2024
Agricultural Research Service
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)58
SRA Experiments58
Other datasets
BioSample58
Assembly58
Assembly details:
Assembly levelNumber of Assemblies
58
58
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_040122275.1ContigJBEDWI000000000SAMN41675795
Ceca1F-B5-100218
GCA_040122265.1ContigJBEDWL000000000SAMN41675798
Ceca2F-2-I7-103018
GCA_040122245.1ContigJBEDWK000000000SAMN41675797
Ceca-1F-H2
GCA_040122235.1ContigJBEDWJ000000000SAMN41675796
Ceca1F-F3-101618
GCA_040122145.1ContigJBEDWR000000000SAMN41675804
Ceca-5F-1-B5
GCA_040122155.1ContigJBEDWO000000000SAMN41675801
Ceca3F-C8-121118
GCA_040122105.1ContigJBEDWP000000000SAMN41675802
Ceca-4F-B4
GCA_040122075.1ContigJBEDWT000000000SAMN41675806
Ceca5F-B10-100218
GCA_040122025.1ContigJBEDWV000000000SAMN41675808
Ceca5F-H6-053018
GCA_040121955.1ContigJBEDWY000000000SAMN41675811
Crop1D-B2-100218
GCA_040121905.1ContigJBEDXC000000000SAMN41675815
Crop3B-C3-100218
GCA_040121885.1ContigJBEDXD000000000SAMN41675816
Crop3B-D4-121118
GCA_040121835.1ContigJBEDXE000000000SAMN41675817
Crop3B-J2-103018
GCA_040121805.1ContigJBEDXH000000000SAMN41675820
Crop4B-C4-100218
GCA_040121755.1ContigJBEDXJ000000000SAMN41675822
Crop4B-G1-101618
GCA_040121725.1ContigJBEDXK000000000SAMN41675823
Crop4D-1-B7-030618
GCA_040121705.1ContigJBEDXL000000000SAMN41675824
Crop4D-H8-053018
GCA_040121675.1ContigJBEDXO000000000SAMN41675827
Crop5B-G2-050118
GCA_040121645.1ContigJBEDXP000000000SAMN41675828
Crop5D-B4-100218
GCA_040121625.1ContigJBEDXQ000000000SAMN41675829
Crop5D-B6-121118
GCA_040121545.1ContigJBEDXV000000000SAMN41675834
Post-Carcass-1B-H2
GCA_040121525.1ContigJBEDXU000000000SAMN41675833
Post-Carcass-1B-G8-BlueBox
GCA_040121505.1ContigJBEDXW000000000SAMN41675835
Post-Carcass-2B-D5
GCA_040121475.1ContigJBEDXX000000000SAMN41675836
Post-Carcass-2B-J9
GCA_040121465.1ContigJBEDXY000000000SAMN41675837
Post-Carcass-4B-H6
GCA_040121425.1ContigJBEDXZ000000000SAMN41675838
Post-Carcass-5B-D6
GCA_040121405.1ContigJBEDYB000000000SAMN41675840
Post-Carcass-5B-H7
GCA_040121335.1ContigJBEDYE000000000SAMN41675843
Pre-Carcass1B-G3-10162018
GCA_040121315.1ContigJBEDYG000000000SAMN41675845
Pre-Carcass3B-F4-12112018
GCA_040121255.1ContigJBEDYI000000000SAMN41675847
Pre-Carcass4B-D2-10022018
GCA_040121235.1ContigJBEDYK000000000SAMN41675849
Pre-Carcass4B-G7-10162018
GCA_040121175.1ContigJBEDYM000000000SAMN41675851
Pre-Carcass5B-D3-10022018
GCA_040121145.1ContigJBEDYN000000000SAMN41675852
Pre-leg2B-E2-05012018
GCA_040121215.1ContigJBEDYL000000000SAMN41675850
Pre-Carcass4B-J8-10302018
GCA_040121195.1ContigJBEDYJ000000000SAMN41675848
Pre-Carcass4B-G6-05302018
GCA_040121295.1ContigJBEDYF000000000SAMN41675844
Pre-Carcass2B-G4-05302018
GCA_040121275.1ContigJBEDYH000000000SAMN41675846
Pre-Carcass4B-C4-03062018
GCA_040121385.1ContigJBEDYC000000000SAMN41675841
Post-leg3B-I8-12112018
GCA_040121435.1ContigJBEDYA000000000SAMN41675839
Post-Carcass-5B-F3
GCA_040121605.1ContigJBEDXT000000000SAMN41675832
Post-Carcass-1B-E6
GCA_040121585.1ContigJBEDXR000000000SAMN41675830
Crop5D-E5-050118
GCA_040121565.1ContigJBEDXS000000000SAMN41675831
Post-Carcass-1B-D4
GCA_040121665.1ContigJBEDXN000000000SAMN41675826
Crop5B-C3-030618
GCA_040121715.1ContigJBEDXM000000000SAMN41675825
Crop4D-I4-103018
GCA_040121825.1ContigJBEDXG000000000SAMN41675819
Crop4B-C2-030618
GCA_040121785.1ContigJBEDXI000000000SAMN41675821
Crop4B-F8-050118
GCA_040121815.1ContigJBEDXF000000000SAMN41675818
Crop3D-H7-053018
GCA_040121915.1ContigJBEDXA000000000SAMN41675813
Crop2B-F7-050118
GCA_040122005.1ContigJBEDWX000000000SAMN41675810
Crop1B-I9-I9-053018
GCA_040122015.1ContigJBEDWU000000000SAMN41675807
Ceca-5F-D6
GCA_040121975.1ContigJBEDWZ000000000SAMN41675812
Crop1D-H1-103018
GCA_040121935.1ContigJBEDXB000000000SAMN41675814
Crop2B-I1-103018
GCA_040122035.1ContigJBEDWW000000000SAMN41675809
Crop1B-F10-101618
GCA_040122125.1ContigJBEDWQ000000000SAMN41675803
Ceca-4F-H5
GCA_040122225.1ContigJBEDWM000000000SAMN41675799
Ceca2F-I6-103018
GCA_040122205.1ContigJBEDWN000000000SAMN41675800
Ceca-3F-B3
GCA_040122135.1ContigJBEDWS000000000SAMN41675805
Ceca5F-2-F9-101618
GCA_040121355.1ContigJBEDYD000000000SAMN41675842
Pre-Carcass1B-F4-05012018
SRA Data Details
ParameterValue
Data volume, Gbases15
Data volume, Mbytes7495

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