PacBio HiFi sequencing of Mycobacterium tuberculos... (ID 1093986) - BioProject

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Accession: PRJEB73759 ID: 1093986

PacBio HiFi sequencing of Mycobacterium tuberculosis outbreak strains

16 strains of the "Bernese outbreak" were sequenced to 1) assess the completeness and accuracy of assemblies created from PacBio HiFi (Sequel II) reads, and to 2) characterize the different types of DNA polymorphisms in the strains. More...

Accession	PRJEB73759
Scope	Monoisolate
Submission	Registration date: 30-Mar-2024 Swiss Tropical and Public Health Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	17
SRA Experiments	34
Other datasets
BioSample	17
Assembly	17

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

17
17

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_963993285.1	1	SAMEA115401572	P042-N1430	Mycobacterium tuberculosis
GCA_963993185.1	1	SAMEA115401577	P074-N1402	Mycobacterium tuberculosis
GCA_963993295.1	1	SAMEA115401575	P066-N1411	Mycobacterium tuberculosis
GCA_963993195.1	1	SAMEA115401566	P008-N1380	Mycobacterium tuberculosis
GCA_963993205.1	1	SAMEA115401564	P006-N1591	Mycobacterium tuberculosis
GCA_963993215.1	1	SAMEA115401568	P020-N1386	Mycobacterium tuberculosis
GCA_963993225.1	1	SAMEA115401563	P003-N1374	Mycobacterium tuberculosis
GCA_963993235.1	1	SAMEA115401571	P034-N1426	Mycobacterium tuberculosis
GCA_963993135.1	1	SAMEA115401567	P010-N1385	Mycobacterium tuberculosis
GCA_963993245.1	1	SAMEA115401569	P022-N1431	Mycobacterium tuberculosis
GCA_963993145.1	1	SAMEA115401561	N1015	Mycobacterium tuberculosis
GCA_963993255.1	1	SAMEA115401574	P059-N1392	Mycobacterium tuberculosis
GCA_963993155.1	1	SAMEA115401562	P001-N1377	Mycobacterium tuberculosis
GCA_963993265.1	1	SAMEA115401573	P052-N1429	Mycobacterium tuberculosis
GCA_963993165.1	1	SAMEA115401570	P028-N1362	Mycobacterium tuberculosis
GCA_963993275.1	1	SAMEA115401576	P073-N1394	Mycobacterium tuberculosis
GCA_963993175.1	1	SAMEA115401565	P007-N1108	Mycobacterium tuberculosis

SRA Data Details

Parameter	Value
Data volume, Gbases	8
Data volume, Mbytes	4614

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PacBio HiFi sequencing of Mycobacterium tuberculosis outbreak strains

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