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Accession: PRJNA1057299 ID: 1057299

Clostridioides difficile

Clostridioides difficile Raw sequence reads

See Genome Information for Clostridioides difficile
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718 additional projects are related by organism.
Clostridioides difficile Infection (CDI) represents a significant and ongoing threat to the safe delivery of modern healthcare. More...
AccessionPRJNA1057299
Data TypeRaw sequence reads
ScopeMultiisolate
OrganismClostridioides difficile[Taxonomy ID: 1496]
Bacteria; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile
Publications
  • Published online: Bloomfield M et al., "Early identification of a ward-based outbreak of Clostridioides difficile using prospective multilocus sequence type-based Oxford Nanopore genomic surveillance", Infection Control & Hospital Epidemiology, 2024;:1-7
SubmissionRegistration date: 15-Feb-2024
Institute of Environmental Science and Research
RelevanceMedical
Locus Tag Prefixcd221108
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)2
SRA Experiments116
Protein Sequences3619
Other datasets
BioSample116
Assembly1
Assembly details:
AssemblyLevelChrsBioSampleTaxonomy
GCA_036630125.1Complete genome
2
SAMN39127314
Clostridioides difficile
SRA Data Details
ParameterValue
Data volume, Gbases18
Data volume, Mbytes15902

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