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Accession: PRJNA1047202 ID: 1047202

CEBP-Beta/IL-1-Beta/ TNF-alpha Feedback Loop Drives Drug Resistance to BCL2 and MDM2 Inhibitors in Monocytic Leukemia Cells (human)

See Genome Information for Homo sapiens
To uncover the mechanisms of MDM2 inhibitor resistance that are mediated by IL-1, we performed RNAseq on three primary AML patient cells treated with idasanutlin in the presence or absence of IL-1beta. These three leukemia samples were chosen because they exhibit high blast counts and are protected by IL-1beta when treated with idasanutlin, as determined by apoptosis assay. We observed that a majority of the major p53 pathway targets remained upregulated in the presence of IL-1beta. We next performed differential expressed gene (DEG) analysis following IL-1beta treatment with and without idasanutlin. IL-1beta treatment upregulated 3295, 1353, and 680 genes with >=1 Log2FC, in each of the three patient samples, and a significant majority of these genes (82%, 62.4%, and 47.6%)... (for more see dbGaP study page.)
AccessionPRJNA1047202; dbGaP: phs003479
TypeUmbrella project (Subtype:Authorized Access)
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
SubmissionRegistration date: 30-Nov-2023
NCI
RelevanceMedical
SRA Data Details
ParameterValue
Data volume, Gbases395
Data volume, Tbytes0.12
CEBP-Beta/IL-1-Beta/ TNF-alpha Feedback Loop Drives Drug Resistance to BCL2 and MDM2 Inhibitors in Monocytic Leukemia Cells encompasses the following sub-project:
Project TypeNumber of Projects
Phenotype or Genotype1
BioProject
accession
OrganismTitle
PRJNA1047203Homo sapiensCEBP-Beta/IL-1-Beta/ TNF-alpha Feedback Loop Drives Drug Resistance to BCL2 and MDM2 Inhibitors in Monocytic Leukemia Cells (OREGON HEALTH & SCIENCE UNIVERSITY)

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