ID 1044158 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA1044158 ID: 1044158

Metagenome sequences of Lake Bonney

metagenome sequecing data from water column of Lake Bonney, Antarctica

Accession	PRJNA1044158
Data Type	Genome sequencing
Scope	Multispecies
Publications	Lee H et al., "Microbial assemblages and associated biogeochemical processes in Lake Bonney, a permanently ice-covered lake in the McMurdo Dry Valleys, Antarctica.", Environ Microbiome, 2024 Aug 20;19(1):60
Grants	"LTER: Ecosystem Response to Amplified Landscape Connectivity in the McMurdo Dry Valleys, Antarctica" (Grant ID 1637708, National Science Foundation) "Preliminary study on microbial ecology in Antarctic lakes based on single-cell analysis" (Grant ID PE18340, Korea Polar Research Institute) "Ecophysiology of Antarctic terrestrial organisms to reveal mechanisms of adaptation to changing environment" (Grant ID PE22130, Korea Polar Research Institute)
Submission	Registration date: 22-Nov-2023 Korea Polar Research Institute
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	120
Publications
PubMed	1
PMC	1
Other datasets
BioSample	130
Assembly	120

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

120
120

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_041688925.1	JBDNHG000000000	SAMN38376542	concoct.245.ELB	Acidimicrobiales bacterium
GCA_041688815.1	JBDNHK000000000	SAMN38376546	concoct.255.ELB	Acidimicrobiales bacterium
GCA_041688105.1	JBDNIT000000000	SAMN38376581	metabat2.13.WLB	Acidimicrobiales bacterium
GCA_041687805.1	JBDNJK000000000	SAMN38376598	metabat2.72.WLB	Acidimicrobiales bacterium
GCA_041687945.1	JBDNJD000000000	SAMN38376591	metabat2.43_sub.WLB	Akkermansiaceae bacterium
GCA_041688245.1	JBDNIP000000000	SAMN38376577	concoct.79.WLB	Algoriphagus sp.
GCA_041690095.1	JBDNEZ000000000	SAMN38376483	concoct.10.ELB	Anderseniella sp.
GCA_041688475.1	JBDNID000000000	SAMN38376565	concoct.54.WLB	Aquiluna sp.
GCA_041690035.1	JBDNFC000000000	SAMN38376486	concoct.103.WLB	Bacteroidia bacterium
GCA_041689715.1	JBDNFQ000000000	SAMN38376500	concoct.142.ELB	Bacteroidia bacterium
GCA_041689475.1	JBDNGC000000000	SAMN38376512	concoct.170.WLB	Bacteroidia bacterium
GCA_041688385.1	JBDNIH000000000	SAMN38376569	concoct.61.ELB	Bacteroidia bacterium
GCA_041688295.1	JBDNIM000000000	SAMN38376574	concoct.71.WLB	Bacteroidia bacterium
GCA_041688735.1	JBDNHO000000000	SAMN38376550	concoct.271.ELB	Brevundimonas sp.
GCA_041688905.1	JBDNHF000000000	SAMN38376541	concoct.244.WLB	Burkholderiaceae bacterium
GCA_041688825.1	JBDNHM000000000	SAMN38376548	concoct.266.ELB	Burkholderiaceae bacterium
GCA_041688225.1	JBDNIN000000000	SAMN38376575	concoct.73.WLB	Burkholderiaceae bacterium
GCA_041689955.1	JBDNFG000000000	SAMN38376490	concoct.111.ELB	Burkholderiaceae bacterium
GCA_041689305.1	JBDNGM000000000	SAMN38376522	concoct.193.ELB	Burkholderiales bacterium
GCA_041687845.1	JBDNJJ000000000	SAMN38376597	metabat2.66.WLB	Burkholderiales bacterium
GCA_041688545.1	JBDNHY000000000	SAMN38376560	concoct.47_sub.WLB	Caldilineaceae bacterium
GCA_041689755.1	JBDNFR000000000	SAMN38376501	concoct.151_sub.ELB	Caldilineaceae bacterium
GCA_041689575.1	JBDNFX000000000	SAMN38376507	concoct.159.WLB	Candidatus Kapaibacterium sp.
GCA_041688685.1	JBDNHS000000000	SAMN38376554	concoct.33.ELB	Candidatus Kapaibacterium sp.
GCA_041688645.1	JBDNHV000000000	SAMN38376557	concoct.41.ELB	Candidatus Kapaibacterium sp.
GCA_041689915.1	JBDNFH000000000	SAMN38376491	concoct.114.ELB	Candidatus Nanopelagicales bacterium
GCA_041689815.1	JBDNFO000000000	SAMN38376498	concoct.140.WLB	Candidatus Nanopelagicales bacterium
GCA_041689635.1	JBDNFV000000000	SAMN38376505	concoct.157.WLB	Candidatus Nanopelagicales bacterium
GCA_041689325.1	JBDNGK000000000	SAMN38376520	concoct.19.ELB	Candidatus Nanopelagicales bacterium
GCA_041687715.1	JBDNJO000000000	SAMN38376602	metabat2.80.ELB	Candidatus Nanopelagicales bacterium
GCA_041688135.1	JBDNIU000000000	SAMN38376582	metabat2.18.WLB	Candidatus Nanopelagicales bacterium
GCA_041688155.1	JBDNIW000000000	SAMN38376584	metabat2.26_sub.ELB	Candidatus Paceibacterota bacterium
GCA_041687825.1	JBDNJI000000000	SAMN38376596	metabat2.61.WLB	Candidatus Planktophila sp.
GCA_041687995.1	JBDNJB000000000	SAMN38376589	metabat2.4.ELB	Candidatus Planktophila sp.
GCA_041688435.1	JBDNIF000000000	SAMN38376567	concoct.58.WLB	Cellulophaga sp.
GCA_041688145.1	JBDNIV000000000	SAMN38376583	metabat2.23.ELB	Chlamydiia bacterium
GCA_041689165.1	JBDNGR000000000	SAMN38376527	concoct.216.WLB	Coxiellaceae bacterium
GCA_041688525.1	JBDNIA000000000	SAMN38376562	concoct.5.WLB	Crocinitomicaceae bacterium
GCA_041689515.1	JBDNGB000000000	SAMN38376511	concoct.169.ELB	Cyclobacteriaceae bacterium
GCA_041689935.1	JBDNFI000000000	SAMN38376492	concoct.114.WLB	Cyclobacteriaceae bacterium
GCA_041689125.1	JBDNGV000000000	SAMN38376531	concoct.228.ELB	Daejeonella sp.
GCA_041688965.1	JBDNHD000000000	SAMN38376539	concoct.243.WLB	Daejeonella sp.
GCA_041689995.1	JBDNFD000000000	SAMN38376487	concoct.105.WLB	Flavobacteriaceae bacterium
GCA_041689245.1	JBDNGO000000000	SAMN38376524	concoct.198.ELB	Flavobacteriaceae bacterium
GCA_041689535.1	JBDNGA000000000	SAMN38376510	concoct.164.WLB	Flavobacteriaceae bacterium
GCA_041688885.1	JBDNHH000000000	SAMN38376543	concoct.248.ELB	Flavobacteriaceae bacterium
GCA_041688985.1	JBDNHB000000000	SAMN38376537	concoct.241.ELB	Flavobacteriales bacterium
GCA_041688765.1	JBDNHP000000000	SAMN38376551	concoct.273.ELB	Flavobacteriales bacterium
GCA_041687875.1	JBDNJH000000000	SAMN38376595	metabat2.60.ELB	Flavobacteriales bacterium
GCA_041689065.1	JBDNGY000000000	SAMN38376534	concoct.234.WLB	Flavobacteriales bacterium
GCA_041688835.1	JBDNHJ000000000	SAMN38376545	concoct.253.ELB	Fuerstiella sp.
GCA_041689795.1	JBDNFN000000000	SAMN38376497	concoct.14.ELB	Fuerstiella sp.
GCA_041689025.1	JBDNHA000000000	SAMN38376536	concoct.240_sub.WLB	Fuerstiella sp.
GCA_041688005.1	JBDNJA000000000	SAMN38376588	metabat2.34_sub.WLB	Gammaproteobacteria bacterium
GCA_041689615.1	JBDNFW000000000	SAMN38376506	concoct.158.ELB	Gammaproteobacteria bacterium
GCA_041694635.1	JBDNHI000000000	SAMN38376544	concoct.25.ELB	Gemmataceae bacterium
GCA_041688315.1	JBDNII000000000	SAMN38376570	concoct.61.WLB	Gemmataceae bacterium
GCA_041688945.1	JBDNHE000000000	SAMN38376540	concoct.244_sub.ELB	Gemmatimonadota bacterium
GCA_041689185.1	JBDNGS000000000	SAMN38376528	concoct.222.ELB	Gemmatimonas sp.
GCA_041689975.1	JBDNFF000000000	SAMN38376489	concoct.107.WLB	Gemmatimonas sp.
GCA_041689145.1	JBDNGT000000000	SAMN38376529	concoct.225.WLB	Geopsychrobacter sp.
GCA_041688725.1	JBDNHN000000000	SAMN38376549	concoct.27.WLB	Gillisia sp.
GCA_041689595.1	JBDNFY000000000	SAMN38376508	concoct.161_sub.ELB	Gimesia sp.
GCA_041689895.1	JBDNFJ000000000	SAMN38376493	concoct.115.WLB	Gracilimonas sp.
GCA_041689345.1	JBDNGI000000000	SAMN38376518	concoct.185.WLB	Halanaerobiales bacterium
GCA_041689445.1	JBDNGE000000000	SAMN38376514	concoct.176.WLB	Halioglobus sp.
GCA_041688425.1	JBDNIE000000000	SAMN38376566	concoct.55.ELB	Halioglobus sp.
GCA_041688025.1	JBDNIZ000000000	SAMN38376587	metabat2.3.ELB	Halolamina sp.
GCA_041689495.1	JBDNGD000000000	SAMN38376513	concoct.171.ELB	Halomonas sp.
GCA_041689225.1	JBDNGN000000000	SAMN38376523	concoct.196.ELB	Hyphomonas sp.
GCA_041689845.1	JBDNFL000000000	SAMN38376495	concoct.125.ELB	Ilumatobacter sp.
GCA_041688325.1	JBDNIJ000000000	SAMN38376571	concoct.62.WLB	Ilumatobacter sp.
GCA_041689735.1	JBDNGW000000000	SAMN38376532	concoct.231.WLB	Leeuwenhoekiella sp.
GCA_041687915.1	JBDNJE000000000	SAMN38376592	metabat2.51.WLB	Mariniblastus sp.
GCA_041688615.1	JBDNHU000000000	SAMN38376556	concoct.38.ELB	Mariniblastus sp.
GCA_041688195.1	JBDNIR000000000	SAMN38376579	concoct.9.ELB	Marinobacter sp.
GCA_041687795.1	JBDNJL000000000	SAMN38376599	metabat2.73_sub.WLB	Methylotenera sp.
GCA_041689085.1	JBDNGX000000000	SAMN38376533	concoct.232.ELB	Methylotenera sp.
GCA_041688365.1	JBDNIK000000000	SAMN38376572	concoct.63.ELB	Microthrixaceae bacterium
GCA_041690055.1	JBDNFB000000000	SAMN38376485	concoct.101.ELB	Myxococcota bacterium
GCA_041688045.1	JBDNIX000000000	SAMN38376585	metabat2.28_sub.ELB	Nitriliruptoraceae bacterium
GCA_041689875.1	JBDNFK000000000	SAMN38376494	concoct.117_sub.WLB	Octadecabacter sp.
GCA_041689555.1	JBDNFZ000000000	SAMN38376509	concoct.162_sub.ELB	Opitutaceae bacterium
GCA_041689285.1	JBDNGL000000000	SAMN38376521	concoct.190.WLB	Opitutaceae bacterium
GCA_041689425.1	JBDNGF000000000	SAMN38376515	concoct.178.WLB	Opitutus sp.
GCA_041688015.1	JBDNIY000000000	SAMN38376586	metabat2.29.WLB	Parvibaculaceae bacterium
GCA_041688845.1	JBDNHL000000000	SAMN38376547	concoct.26_sub.ELB	Pelagibacteraceae bacterium
GCA_041689695.1	JBDNFT000000000	SAMN38376503	concoct.155.WLB	Planctomycetaceae bacterium
GCA_041689675.1	JBDNFS000000000	SAMN38376502	concoct.155.ELB	Planctomycetaceae bacterium
GCA_041688565.1	JBDNHX000000000	SAMN38376559	concoct.44.WLB	Planctomycetaceae bacterium
GCA_041687755.1	JBDNJM000000000	SAMN38376600	metabat2.76_sub.ELB	Planctomycetota bacterium
GCA_041689105.1	JBDNGU000000000	SAMN38376530	concoct.226.WLB	Polaromonas sp.
GCA_041688535.1	JBDNIB000000000	SAMN38376563	concoct.51.WLB	Prosthecobacter sp.
GCA_041687725.1	JBDNJN000000000	SAMN38376601	metabat2.78.ELB	Pseudanabaena sp.
GCA_041687935.1	JBDNJC000000000	SAMN38376590	metabat2.41.WLB	Pseudanabaena sp.
GCA_041688095.1	JBDNIS000000000	SAMN38376580	concoct.97.WLB	Pseudohongiellaceae bacterium
GCA_041689205.1	JBDNGQ000000000	SAMN38376526	concoct.215.ELB	Pseudohongiellaceae bacterium
GCA_041688745.1	JBDNHR000000000	SAMN38376553	concoct.3.ELB	Pseudolabrys sp.
GCA_041688625.1	JBDNHW000000000	SAMN38376558	concoct.42.WLB	Pseudoxanthomonas sp.
GCA_041689385.1	JBDNGH000000000	SAMN38376517	concoct.184.ELB	Psychroflexus sp.
GCA_041689655.1	JBDNFU000000000	SAMN38376504	concoct.157.ELB	Rhodoferax sp.
GCA_041690015.1	JBDNFE000000000	SAMN38376488	concoct.106_sub.ELB	Rhodopirellula sp.
GCA_041688415.1	JBDNIG000000000	SAMN38376568	concoct.60.WLB	Rhodopirellula sp.
GCA_041688215.1	JBDNIO000000000	SAMN38376576	concoct.76.WLB	Salinisphaeraceae bacterium
GCA_041689835.1	JBDNFM000000000	SAMN38376496	concoct.139.ELB	Sandarakinorhabdus sp.
GCA_041689045.1	JBDNGZ000000000	SAMN38376535	concoct.235_sub.WLB	Saprospiraceae bacterium
GCA_041688715.1	JBDNHQ000000000	SAMN38376552	concoct.28_sub.WLB	Saprospiraceae bacterium
GCA_041689005.1	JBDNHC000000000	SAMN38376538	concoct.243.ELB	Sneathiella sp.
GCA_041687895.1	JBDNJG000000000	SAMN38376594	metabat2.6.ELB	Solirubrobacteraceae bacterium
GCA_041687955.1	JBDNJF000000000	SAMN38376593	metabat2.53.WLB	Solirubrobacteraceae bacterium
GCA_041690075.1	JBDNFA000000000	SAMN38376484	concoct.100.ELB	Sphingorhabdus sp.
GCA_041689775.1	JBDNFP000000000	SAMN38376499	concoct.141.WLB	Spirosomataceae bacterium
GCA_041688235.1	JBDNIQ000000000	SAMN38376578	concoct.83_sub.ELB	Spirosomataceae bacterium
GCA_041689405.1	JBDNGG000000000	SAMN38376516	concoct.179.WLB	Terrimicrobiaceae bacterium
GCA_041688495.1	JBDNIC000000000	SAMN38376564	concoct.53.ELB	Terrimicrobiaceae bacterium
GCA_041688355.1	JBDNIL000000000	SAMN38376573	concoct.67.WLB	Verrucomicrobiales bacterium
GCA_041688635.1	JBDNHT000000000	SAMN38376555	concoct.35.ELB	Verrucomicrobiales bacterium
GCA_041688515.1	JBDNHZ000000000	SAMN38376561	concoct.48.WLB	Verrucomicrobiota bacterium
GCA_041689265.1	JBDNGP000000000	SAMN38376525	concoct.203.ELB	Verrucomicrobiota bacterium
GCA_041689365.1	JBDNGJ000000000	SAMN38376519	concoct.187.ELB	Virgibacillus sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	61
Data volume, Mbytes	37855

BioProject

Result Filters

Display Settings:

Send to:

Metagenome sequences of Lake Bonney

Supplemental Content

Related information

Recent activity