ID 1033154 - BioProject

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Accession: PRJNA1033154 ID: 1033154

Multilocus Sequence and Phenotypic Analysis of Pectobacterium and Dickeya Type Strains for Identification of soft rot Pectobacteriaceae from Symptomatic Potato Stems and Tubers in Pennsylvania

bacteria were isolated from potatoes exhibiting blackleg and soft rot symptoms in Pennsylvania, USA

Accession	PRJNA1033154
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Mainello-Land AM et al., "Multilocus sequence and phenotypic analysis of Pectobacterium and Dickeya type strains for identification of soft rot Pectobacteriaceae from symptomatic potato stems and tubers in Pennsylvania.", Syst Appl Microbiol, 2024 Jan;47(1):126476
Grants	"Partnership Potato Program" (Grant ID 8030-62660-003-00D, United States Department of Agriculture/Agricultural Research Service State Partnership Potato Program) "project PEN04825" (Grant ID accession #7004585, United States Department of Agriculture National Institute of Food and Federal Appropriations)
Submission	Registration date: 28-Oct-2023 Pennsylvania State University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	27
Publications
PubMed	1
Other datasets
BioSample	27
Assembly	27

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

27
27

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_035066845.1	JAWQQY000000000	SAMN38025000	BP9310	Pectobacterium carotovorum
GCA_035066995.1	JAWQQV000000000	SAMN38024997	BP9294	Pectobacterium carotovorum
GCA_035066985.1	JAWQQU000000000	SAMN38024996	BP9250	Pectobacterium carotovorum
GCA_035066945.1	JAWQQS000000000	SAMN38024994	BP9195	Pectobacterium carotovorum
GCA_035067065.1	JAWQQP000000000	SAMN38024991	BP9164	Pectobacterium carotovorum
GCA_035066925.1	JAWQQR000000000	SAMN38024993	BP9174	Pectobacterium carotovorum
GCA_035066895.1	JAWQQX000000000	SAMN38024999	BP9308	Pectobacterium carotovorum
GCA_035067185.1	JAWQQH000000000	SAMN38024983	BP9067	Pectobacterium carotovorum
GCA_035067145.1	JAWQQL000000000	SAMN38024987	BP9128	Pectobacterium carotovorum
GCA_035067195.1	JAWQQI000000000	SAMN38024984	BP9083	Pectobacterium parmentieri
GCA_035067245.1	JAWQQF000000000	SAMN38024981	BP9038	Pectobacterium parmentieri
GCA_035067215.1	JAWQQJ000000000	SAMN38024985	BP9089	Pectobacterium parmentieri
GCA_035066935.1	JAWQQT000000000	SAMN38024995	BP9234	Pectobacterium parmentieri
GCA_035066825.1	JAWQQZ000000000	SAMN38025001	BP9384	Pectobacterium parmentieri
GCA_035066835.1	JAWQQW000000000	SAMN38024998	BP9302	Pectobacterium parmentieri
GCA_035067295.1	JAWQQE000000000	SAMN38024980	BP9026	Pectobacterium polaris
GCA_035067125.1	JAWQQM000000000	SAMN38024988	BP9129	Pectobacterium polonicum
GCA_035067325.1	JAWQQC000000000	SAMN38024978	BP9017	Pectobacterium punjabense
GCA_035067085.1	JAWQQN000000000	SAMN38024989	BP9130	Pectobacterium versatile
GCA_035067165.1	JAWQQK000000000	SAMN38024986	BP9109	Pectobacterium versatile
GCA_035067285.1	JAWQQD000000000	SAMN38024979	BP9019	Pectobacterium versatile
GCA_035067265.1	JAWQQG000000000	SAMN38024982	BP9052	Pectobacterium versatile
GCA_035067365.1	JAWQQA000000000	SAMN38024976	BP9002	Pectobacterium versatile
GCA_035067345.1	JAWQQB000000000	SAMN38024977	BP9004	Pectobacterium versatile
GCA_035066875.1	JAWQRA000000000	SAMN38025002	BP9389	Pectobacterium versatile
GCA_035067045.1	JAWQQO000000000	SAMN38024990	BP9149	Pectobacterium versatile
GCA_035067025.1	JAWQQQ000000000	SAMN38024992	BP9166	Pectobacterium versatile

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Multilocus Sequence and Phenotypic Analysis of Pectobacterium and Dickeya Type Strains for Identification of soft rot Pectobacteriaceae from Symptomatic Potato Stems and Tubers in Pennsylvania

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