See
Genome Information for Caenorhabditis elegans
Alleles of C. elegans genes mog-5 and sacy-1 were found to increase usage of proximal 3' splice sites
Overall design: Alternate splicing analysis of sacy-1(tn1385) vs N2(wildtype) and mog-5(az192) vs N2
| Accession | PRJNA1030370; GEO: GSE245899 |
| Scope | Multiisolate |
| Organism | Caenorhabditis elegans[Taxonomy ID: 6239] Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans |
| Publications | Osterhoudt K et al., "Spliceosomal helicases DDX41/SACY-1 and PRP22/MOG-5 both contribute to proofreading against proximal 3' splice site usage.", RNA, 2024 Mar 18;30(4):404-417 |
| Grants | - "Uncovering Mechanisms of 5' Splice Site Fidelity" (Grant ID R01 GM135221, National Institute of General Medical Sciences)
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| Submission | Registration date: 20-Oct-2023
Zahler Lab, MCD Biology, UC Santa Cruz |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 12 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 12 |
| GEO DataSets | 1 |