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Accession: PRJEB66194 ID: 1025444

Genomic insights into Vibrio cholerae isolates associated with cholera outbreaks in the Democratic Republic of Congo between 2018 and 2022

For the past three decades, the Democratic Republic of Congo (DRC) has been severely affected by recurrent cholera outbreaks. More...
AccessionPRJEB66194
Data TypeGenome sequencing
ScopeMonoisolate
SubmissionRegistration date: 8-Oct-2023
Institut de recherche experimentale et clinique - IREC
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)22657
WGS master173
SRA Experiments301
Other datasets
BioSample265
Assembly173
Assembly details:
Assembly levelNumber of Assemblies
173
173
AssemblyLevelWGSBioSampleTaxonomy
GCA_964185025.1ContigCAXLCS000000000SAMEA114395382
GCA_964186235.1ContigCAXLHH000000000SAMEA114395466
GCA_964185395.1ContigCAXLET000000000SAMEA114395375
GCA_964185275.1ContigCAXLFW000000000SAMEA114395449
GCA_964186485.1ContigCAXLIP000000000SAMEA114395469
GCA_964185575.1ContigCAXLFC000000000SAMEA114395379
GCA_964185455.1ContigCAXLEE000000000SAMEA114395337
GCA_964184815.1ContigCAXLDF000000000SAMEA114395480
GCA_964185905.1ContigCAXLIL000000000SAMEA114395356
GCA_964184915.1ContigCAXLCH000000000SAMEA114395413
GCA_964185335.1ContigCAXLEH000000000SAMEA114395427
GCA_964186545.1ContigCAXLJA000000000SAMEA114395390
GCA_964185215.1ContigCAXLDA000000000SAMEA114395334
GCA_964186425.1ContigCAXLID000000000SAMEA114395459
GCA_964185805.1ContigCAXLGF000000000SAMEA114395363
GCA_964185515.1ContigCAXLEO000000000SAMEA114395444
GCA_964184935.1ContigCAXLCM000000000SAMEA114395420
GCA_964185225.1ContigCAXLDV000000000SAMEA114395352
GCA_964186435.1ContigCAXLIA000000000SAMEA114395496
GCA_964185105.1ContigCAXLCU000000000SAMEA114395372
GCA_964186315.1ContigCAXLHK000000000SAMEA114395497
GCA_964185585.1ContigCAXLGA000000000SAMEA114395474
GCA_964185465.1ContigCAXLEB000000000SAMEA114395331
GCA_964185345.1ContigCAXLFX000000000SAMEA114395458
GCA_964184785.1ContigCAXLDE000000000SAMEA114395455
GCA_964185875.1ContigCAXLGL000000000SAMEA114395388
GCA_964185755.1ContigCAXLFI000000000SAMEA114395403
GCA_964185635.1ContigCAXLEM000000000SAMEA114395447
GCA_964185085.1ContigCAXLFD000000000SAMEA114395453
GCA_964186295.1ContigCAXLHS000000000SAMEA114395464
GCA_964186175.1ContigCAXLIG000000000SAMEA114395425
GCA_964186205.1ContigCAXLGV000000000SAMEA114395432
GCA_964185595.1ContigCAXLEN000000000SAMEA114395411
GCA_964185475.1ContigCAXLEU000000000SAMEA114395421
GCA_964185355.1ContigCAXLDT000000000SAMEA114395339
GCA_964186565.1ContigCAXLJC000000000SAMEA114395391
GCA_964185235.1ContigCAXLED000000000SAMEA114395384
GCA_964186445.1ContigCAXLIS000000000SAMEA114395504
GCA_964185825.1ContigCAXLGH000000000SAMEA114395347
GCA_964185705.1ContigCAXLFS000000000SAMEA114395377
GCA_964184975.1ContigCAXLCP000000000SAMEA114395362
GCA_964185265.1ContigCAXLDZ000000000SAMEA114395437
GCA_964186475.1ContigCAXLII000000000SAMEA114395472
GCA_964185145.1ContigCAXLEX000000000SAMEA114395476
GCA_964186355.1ContigCAXLHM000000000SAMEA114395468
GCA_964185375.1ContigCAXLEK000000000SAMEA114395438
GCA_964185255.1ContigCAXLDX000000000SAMEA114395364
GCA_964186465.1ContigCAXLIV000000000SAMEA114395489
GCA_964185135.1ContigCAXLFZ000000000SAMEA114395452
GCA_964186345.1ContigCAXLHT000000000SAMEA114395491
GCA_964185015.1ContigCAXLCZ000000000SAMEA114395383
GCA_964186225.1ContigCAXLHQ000000000SAMEA114395498
GCA_964185385.1ContigCAXLEP000000000SAMEA114395371
GCA_964184735.1ContigCAXLCT000000000SAMEA114395448
GCA_964184855.1ContigCAXLBY000000000SAMEA114395335
GCA_964185945.1ContigCAXLIH000000000SAMEA114395440
GCA_964186305.1ContigCAXLHW000000000SAMEA114395490
GCA_964185695.1ContigCAXLFB000000000SAMEA114395402
GCA_964186105.1ContigCAXLIN000000000SAMEA114395380
GCA_964184725.1ContigCAXLDG000000000SAMEA114395376
GCA_964185815.1ContigCAXLGG000000000SAMEA114395430
GCA_964184845.1ContigCAXLDP000000000SAMEA114395450
GCA_964184965.1ContigCAXLCC000000000SAMEA114395441
GCA_964184835.1ContigCAXLCL000000000SAMEA114395370
GCA_964185925.1ContigCAXLGU000000000SAMEA114395483
GCA_964185005.1ContigCAXLCQ000000000SAMEA114395338
GCA_964185485.1ContigCAXLFA000000000SAMEA114395361
GCA_964185365.1ContigCAXLDR000000000SAMEA114395401
GCA_964185245.1ContigCAXLDW000000000SAMEA114395351
GCA_964186455.1ContigCAXLIC000000000SAMEA114395465
GCA_964185125.1ContigCAXLDM000000000SAMEA114395353
GCA_964186335.1ContigCAXLHY000000000SAMEA114395494
GCA_964185495.1ContigCAXLGD000000000SAMEA114395501
GCA_964184715.1ContigCAXLCV000000000SAMEA114395486
GCA_964184955.1ContigCAXLCI000000000SAMEA114395415
GCA_964186055.1ContigCAXLGO000000000SAMEA114395341
GCA_964185765.1ContigCAXLFQ000000000SAMEA114395343
GCA_964185645.1ContigCAXLFO000000000SAMEA114395407
GCA_964185525.1ContigCAXLEL000000000SAMEA114395442
GCA_964184795.1ContigCAXLCO000000000SAMEA114395366
GCA_964186065.1ContigCAXLIK000000000SAMEA114395443
GCA_964185095.1ContigCAXLFJ000000000SAMEA114395477
GCA_964185535.1ContigCAXLFG000000000SAMEA114395398
GCA_964185885.1ContigCAXLGM000000000SAMEA114395428
GCA_964185405.1ContigCAXLDU000000000SAMEA114395373
GCA_964185775.1ContigCAXLFN000000000SAMEA114395409
GCA_964185655.1ContigCAXLFL000000000SAMEA114395400
GCA_964184895.1ContigCAXLCK000000000SAMEA114395418
GCA_964184775.1ContigCAXLDQ000000000SAMEA114395475
GCA_964185865.1ContigCAXLGW000000000SAMEA114395456
GCA_964185745.1ContigCAXLFK000000000SAMEA114395385
GCA_964186035.1ContigCAXLGQ000000000SAMEA114395365
GCA_964185195.1ContigCAXLDC000000000SAMEA114395345
GCA_964185075.1ContigCAXLDH000000000SAMEA114395395
GCA_964186285.1ContigCAXLHO000000000SAMEA114395470
GCA_964186165.1ContigCAXLIQ000000000SAMEA114395396
GCA_964186045.1ContigCAXLGR000000000SAMEA114395392
GCA_964185505.1ContigCAXLGC000000000SAMEA114395488
GCA_964185615.1ContigCAXLEW000000000SAMEA114395410
GCA_964184885.1ContigCAXLCN000000000SAMEA114395429
GCA_964185625.1ContigCAXLFY000000000SAMEA114395397
GCA_964184765.1ContigCAXLCD000000000SAMEA114395399
GCA_964185855.1ContigCAXLGT000000000SAMEA114395457
GCA_964186145.1ContigCAXLGP000000000SAMEA114395416
GCA_964185185.1ContigCAXLCX000000000SAMEA114395355
GCA_964186395.1ContigCAXLHN000000000SAMEA114395495
GCA_964185065.1ContigCAXLDL000000000SAMEA114395346
GCA_964186275.1ContigCAXLHJ000000000SAMEA114395471
GCA_964185735.1ContigCAXLFP000000000SAMEA114395406
GCA_964184755.1ContigCAXLBZ000000000SAMEA114395368
GCA_964185725.1ContigCAXLFM000000000SAMEA114395357
GCA_964185605.1ContigCAXLFF000000000SAMEA114395344
GCA_964184995.1ContigCAXLCJ000000000SAMEA114395426
GCA_964186005.1ContigCAXLIT000000000SAMEA114395502
GCA_964185285.1ContigCAXLDS000000000SAMEA114395433
GCA_964186495.1ContigCAXLIO000000000SAMEA114395460
GCA_964185165.1ContigCAXLEY000000000SAMEA114395454
GCA_964186375.1ContigCAXLHU000000000SAMEA114395467
GCA_964186125.1ContigCAXLIB000000000SAMEA114395423
GCA_964186245.1ContigCAXLHL000000000SAMEA114395473
GCA_964185035.1ContigCAXLDJ000000000SAMEA114395360
GCA_964186365.1ContigCAXLHP000000000SAMN40438999
GCA_964184865.1ContigCAXLCA000000000SAMEA114395419
GCA_964184875.1ContigCAXLEC000000000SAMEA114395451
GCA_964185965.1ContigCAXLIM000000000SAMEA114395394
GCA_964185045.1ContigCAXLDI000000000SAMEA114395348
GCA_964186255.1ContigCAXLHI000000000SAMEA114395492
GCA_964186135.1ContigCAXLIE000000000SAMEA114395358
GCA_964185295.1ContigCAXLDY000000000SAMEA114395349
GCA_964185175.1ContigCAXLCY000000000SAMEA114395435
GCA_964186385.1ContigCAXLHR000000000SAMEA114395503
GCA_964185055.1ContigCAXLDN000000000SAMEA114395333
GCA_964186265.1ContigCAXLHX000000000SAMEA114395463
GCA_964185845.1ContigCAXLGK000000000SAMEA114395374
GCA_964184985.1ContigCAXLDK000000000SAMEA114395478
GCA_964185155.1ContigCAXLDB000000000SAMEA114395354
GCA_964184745.1ContigCAXLCG000000000SAMEA114395369
GCA_964185715.1ContigCAXLER000000000SAMEA114395359
GCA_964185955.1ContigCAXLIJ000000000SAMEA114395378
GCA_964185305.1ContigCAXLEJ000000000SAMEA114395424
GCA_964185785.1ContigCAXLFU000000000SAMEA114395350
GCA_964186085.1ContigCAXLGS000000000SAMEA114395434
GCA_964185415.1ContigCAXLGB000000000SAMEA114395487
GCA_964185895.1ContigCAXLGN000000000SAMEA114395389
GCA_964186075.1ContigCAXLHD000000000SAMEA114395485
GCA_964186195.1ContigCAXLIR000000000SAMEA114395439
GCA_964185665.1ContigCAXLEQ000000000SAMEA114395445
GCA_964185545.1ContigCAXLFH000000000SAMEA114395412
GCA_964185425.1ContigCAXLEA000000000SAMEA114395336
GCA_964184705.1ContigCAXLCE000000000SAMEA114395408
GCA_964184945.1ContigCAXLCF000000000SAMEA114395414
GCA_964185115.1ContigCAXLCW000000000SAMEA114395332
GCA_964186325.1ContigCAXLHV000000000SAMEA114395493
GCA_964184825.1ContigCAXLCR000000000SAMEA114395367
GCA_964185915.1ContigCAXLIF000000000SAMEA114395422
GCA_964185555.1ContigCAXLFR000000000SAMEA114395446
GCA_964185435.1ContigCAXLEZ000000000SAMEA114395405
GCA_964185315.1ContigCAXLFV000000000SAMEA114395484
GCA_964186405.1ContigCAXLHZ000000000SAMEA114395461
GCA_964185795.1ContigCAXLFT000000000SAMEA114395404
GCA_964185675.1ContigCAXLEV000000000SAMEA114395387
GCA_964184805.1ContigCAXLEI000000000SAMEA114395481
GCA_964184925.1ContigCAXLDO000000000SAMEA114395482
GCA_964184905.1ContigCAXLCB000000000SAMEA114395417
GCA_964185445.1ContigCAXLFE000000000SAMEA114395393
GCA_964185325.1ContigCAXLEF000000000SAMEA114395340
GCA_964186535.1ContigCAXLIZ000000000SAMEA114395381
GCA_964185205.1ContigCAXLDD000000000SAMEA114395342
GCA_964185685.1ContigCAXLEG000000000SAMEA114395386
GCA_964185565.1ContigCAXLES000000000SAMEA114395431
GCA_964160395.1ContigCAXLBR000000000SAMEA114395479
GCA_964161855.1ContigCAXLBS000000000SAMEA114395500
GCA_964160015.1ContigCAXLBQ000000000SAMEA114395499
SRA Data Details
ParameterValue
Data volume, Gbases336
Data volume, Tbytes0.12

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