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Accession: PRJNA1001798 ID: 1001798

Molecular and clinical epidemiology of carbapenem resistant Acinetobacter baumannii ST2 in Oceania: a multicountry cohort study

The study uses molecular epidemiology to characterise the phylogenetic relationships of carbapenem-resistant Acinetobacter baumannii isolated from two major hospitals in Fiji and Samoa and investigate their linkages to other countries within the Oceania region including Australia and New Zealand, and India from South Asia.
AccessionPRJNA1001798
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "Investigating the transmission of carbapenem-resistant Gram-negative pathogens in Colonial War Memorial Hospital , Suva, Fiji" (Grant ID 11695401SLI, Otago Global Health Institute seed grant)
  • "Antimicrobial resistance in Samoa" (Grant ID SC0000169653, RO0000002300, Maurice Wilkins Centre of Research Excellence (CoREs) grant)
SubmissionRegistration date: 3-Aug-2023
University of Otago
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)3
SRA Experiments96
Other datasets
BioSample113
Assembly3
SRA Data Details
ParameterValue
Data volume, Gbases111
Data volume, Mbytes70581

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