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ASM263226v1

Organism name:
Rhodospirillaceae bacterium MC! (a-proteobacteria)
Taxonomy check:
Inconclusive
Isolate:
MC1
BioSample:
SAMN07481817
BioProject:
PRJNA397527
Submitter:
Third Institute of Oceanography, SOA
Date:
2017/10/23
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002632265.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
NQOV01
Assembly method:
CLC NGS Cell v. 3.9
Expected final version:
no
Genome coverage:
100.0x
Sequencing technology:
Illumina HiSeq

IDs: 1368821 [UID] 5483528 [GenBank]

See Genome Information for Rhodospirillaceae bacterium MC!

History (Show revision history)

Comment

Global statistics

Total sequence length2,046,227
Total ungapped length2,046,227
Number of contigs19
Contig N50153,593
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)19

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,046,227192,046,227153,59300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Rhodospirillaceae bacterium MC!Rhodospirillaceae bacterium MC!

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana