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ASM242306v1

Organism name:
Firmicutes bacterium UBA6155 (firmicutes)
Taxonomy check:
Inconclusive
Isolate:
UBA6155
BioSample:
SAMN06453528
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/10/04
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002423065.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DIUP01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
58.02x
Sequencing technology:
Illumina

IDs: 1260591 [UID] 5165738 [GenBank]

See Genome Information for Firmicutes bacterium UBA6155

History (Show revision history)

Comment

Global statistics

Total sequence length2,237,978
Total ungapped length2,237,404
Gaps between scaffolds0
Number of scaffolds91
Scaffold N5048,633
Scaffold L5016
Number of contigs99
Contig N5042,278
Contig L5017
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)91

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,237,978912,237,40448,63380

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Firmicutes bacterium UBA6155Firmicutes bacterium UBA6155

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana