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IDs: 852261 [UID] 3595588 [GenBank] 3649618 [RefSeq]
The WUSC is a large strain collection isolated from clinical samples. Each sample is associated with metadata, including source, isolation site, 16s rRNA, metabolic, and other phenotypic information. The goal is to sample an adequate number of important, yet ... minor species, further adding to the catelogue of sequenced bacterial genomes and improving the diversity of the genomes available to the public. WGS will be preformed on approximely 550 isolates. Samples were selected based on RDP analysis at the genus level. This is a reference genomes for the Human Microbiome Project and the work was funded by the National Institutes of Health (NIH) grant U54 HG004968. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ more
##Genome-Annotation-Data-START##Annotation Provider::NCBIAnnotation Date::03/03/2016 02:32:38Annotation Pipeline::NCBI Prokaryotic Genome Annotation PipelineAnnotation Method::Best-placed reference protein set; GeneMarkS+Annotation Software revision::3.1Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_regionGenes (total)::2,380CDS (total)::2,338Genes (coding)::2,272CDS (coding)::2,272Genes (RNA)::42rRNAs::3, 4 (16S, 23S)complete rRNAs:: partial rRNAs::3, 4 (16S, 23S)tRNAs::31ncRNAs::4Pseudo Genes (total)::66Pseudo Genes (ambiguous residues)::0 of 66Pseudo Genes (frameshifted)::10 of 66Pseudo Genes (incomplete)::50 of 66Pseudo Genes (internal stop)::13 of 66Pseudo Genes (multiple problems)::6 of 66##Genome-Annotation-Data-END##
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