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ASM68209v1

  • Anomalous assembly.
Organism name:
Acinetobacter baumannii 25977_9 (g-proteobacteria)
Taxonomy check:
Failed
Infraspecific name:
Strain: 25977_9
BioSample:
SAMN02692960
BioProject:
PRJNA194990
Submitter:
Institute for Genome Sciences
Date:
2014/05/06
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Assembly anomaly:
unverified source organism
Excluded from RefSeq:
  • unverified source organism
GenBank assembly accession:
GCA_000682095.1 (latest)
RefSeq assembly accession:
GCF_000682095.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JMPF01
Assembly method:
MaSuRCA v. 2.0.3.1
Genome coverage:
62.55x
Sequencing technology:
Illumina

IDs: 174061 [UID] 1060398 [GenBank] 1395838 [RefSeq]

See Genome Information for Acinetobacter baumannii

There are 27702 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,277,914
Total ungapped length4,277,914
Number of contigs353
Contig N5039,092
Contig L5033
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)353

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,277,9143534,277,91439,09200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter baumannii 25977_9Acinetobacter baumannii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_025919905.1Acinetobacter baumanniisuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000368085.1Acinetobacter nosocomialistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type91.9367.0579.97
Best-match type98.0179.4387.55

ANI result

Taxonomy check statusBest match statusComment
Failedmismatchna