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Source database (GenBank or RefSeq) File type

AmassiliensisF0489v1.0

Organism name:: Actinomyces massiliensis F0489 (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: F0489
BioSample:: SAMN00792233
BioProject:: PRJNA78897
Submitter:: J. Craig Venter Institute
Date:: 2012/07/10
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000296275.1 (latest)
RefSeq assembly accession:: GCF_000296275.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AKFT01
Assembly method:: Newbler v. 2.6
Genome coverage:: 31.78x
Sequencing technology:: Illumina

IDs: 484588 [UID] 422808 [GenBank] 484588 [RefSeq]

See Genome Information for Actinomyces massiliensis

Pathogen Detection Resources

There are 14 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000296275.1	=	GCF_000296275.1	AmassiliensisF0489v1.0	Contig	Latest GenBank, Latest RefSeq

Comment

This is a reference genome for the Human Microbiome Project.
This project is co-owned with the Human Microbiome Project DACC.

Global statistics

Total sequence length	3,416,440
Total ungapped length	3,416,440
Number of contigs	233
Contig N50	30,585
Contig L50	33
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	233

	ANI	Query coverage	Subject coverage
Declared type	98.20	92.72	94.60
Best-match type	98.20	92.72	94.60

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AmassiliensisF0489v1.0

See Genome Information for Actinomyces massiliensis

Pathogen Detection Resources

There are 14 assemblies for this organism

History (Show revision history)

Comment

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Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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