U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



IP41384v1

Organism name:
Yersinia artesiana (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: IP41384
BioSample:
SAMEA6448861
BioProject:
PRJEB36031
Submitter:
IP
Date:
2020/04/15
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_902726525.1 (latest)
RefSeq assembly accession:
GCF_902726525.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CACVAC01
Genome coverage:
76x

IDs: 6930961 [UID] 19127718 [GenBank] 20098178 [RefSeq]

See Genome Information for Yersinia artesiana

Pathogen Detection Resources

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,520,664
Total ungapped length4,520,664
Number of contigs31
Contig N50366,780
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)31

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced4,520,664314,520,664366,78000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Yersinia artesianaYersinia artesiana

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_902726545.1Yersinia artesianatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_902726545.1Yersinia artesianatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9996.7299.21
Best-match type99.9996.7299.21

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna