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Pontiella sulfatireligans F21(T) draft genome

Organism name:
Pontiella sulfatireligans (bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: F21(T)
BioSample:
SAMEA5207385
BioProject:
PRJEB24761
Submitter:
WAGENINGEN UNIVERSITY
Date:
2019/04/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900890705.1 (latest)
RefSeq assembly accession:
GCF_900890705.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAHFH01
Genome coverage:
15x

IDs: 2563801 [UID] 9304058 [GenBank] 9341278 [RefSeq]

See Genome Information for Pontiella sulfatireligans

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length7,395,795
Total ungapped length7,395,795
Number of contigs5
Contig N503,727,846
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)5

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced7,395,79557,395,7953,727,84600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Pontiella sulfatireligansPontiella sulfatireligans

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900890425.1Pontiella desulfatanstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type84.5913.9611.93

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected