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57612_E01-3

Organism name:
Mycoplasmopsis meleagridis (bacteria)
Taxonomy check:
OK
Infraspecific name:
Culture-collection: NCTC:10153
Infraspecific name:
Serovar: not available: to be reported later
Infraspecific name:
Strain: NCTC10153
BioSample:
SAMEA104210790
BioProject:
PRJEB6403
Submitter:
SC
Date:
2019/01/29
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900660695.1 (latest)
RefSeq assembly accession:
GCF_900660695.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
100x

IDs: 2252791 [UID] 8461028 [GenBank] 8526678 [RefSeq]

See Genome Information for Mycoplasmopsis meleagridis

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/28/2024 20:08:29
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::562
CDSs (total)::520
Genes (coding)::519
CDSs (with protein)::519
Genes (RNA)::42
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::33
ncRNAs::3
Pseudo Genes (total)::1
CDSs (without protein)::1
Pseudo Genes (ambiguous residues)::0 of 1
Pseudo Genes (frameshifted)::0 of 1
Pseudo Genes (incomplete)::1 of 1
Pseudo Genes (internal stop)::0 of 1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length644,173
Total ungapped length644,173
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900660694.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome LR215042.1=NZ_LR215042.1

Assembly statistics

MoleculeTotal
Length
Chromosome 644,173

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Mycoplasmopsis meleagridisMycoplasmopsis meleagridis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000969625.1Mycoplasmopsis meleagridis ATCC 25294type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000969625.1Mycoplasmopsis meleagridistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9998.3099.84
Best-match type99.9998.3099.84

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna