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Source database (GenBank or RefSeq) File type

fMasArm1.2

This assembly has been replaced. See current version

Organism name:

Mastacembelus armatus (zig-zag eel)

BioSample:

SAMEA104026378

BioProject:

PRJEB25769

Submitter:

Date:

2019/03/16

Assembly type:

haploid (principal pseudohaplotype of diploid)

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_900324485.2 (replaced)

RefSeq assembly accession:

GCF_900324485.2 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

OOHQ02

Genome coverage:

52x

Linked assembly:

GCA_900700395.1 (alternate pseudohaplotype of diploid)

IDs: 2581031 [UID] 9354258 [GenBank] 18337898 [RefSeq]

See Genome Information for Mastacembelus armatus

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_900324485.3	n/a	n/a	fMasArm1.3	Chromosome	Latest GenBank
GCA_900324485.2	≠	GCF_900324485.2	fMasArm1.2	Chromosome	Latest RefSeq, Replaced GenBank
GCA_900324485.1	≠	GCF_900324485.1	fMasArm1.1	Scaffold	Replaced GenBank, Replaced RefSeq

Comment

Global statistics

Total sequence length	591,951,587
Total ungapped length	578,720,247
Gaps between scaffolds	0
Number of scaffolds	123
Scaffold N50	25,090,313
Scaffold L50	11
Number of contigs	359
Contig N50	8,014,513
Contig L50	25
Total number of chromosomes and plasmids	25
Number of component sequences (WGS or clone)	123

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	LR535833.1	=	NC_046633.1	0
Chromosome 2	LR535834.1	=	NC_046634.1	0
Chromosome 3	LR535835.1	=	NC_046635.1	0
Chromosome 4	LR535836.1	=	NC_046636.1	0
Chromosome 5	LR535837.1	=	NC_046637.1	0
Chromosome 6	LR535838.1	=	NC_046638.1	0
Chromosome 7	LR535839.1	=	NC_046639.1	0
Chromosome 8	LR535840.1	=	NC_046640.1	0
Chromosome 9	LR535841.1	=	NC_046641.1	0
Chromosome 10	LR535842.1	=	NC_046642.1	0
Chromosome 11	LR535843.1	=	NC_046643.1	0
Chromosome 12	LR535844.1	=	NC_046644.1	0
Chromosome 13	LR535845.1	=	NC_046645.1	0
Chromosome 14	LR535846.1	=	NC_046646.1	0
Chromosome 15	LR535847.1	=	NC_046647.1	0
Chromosome 16	LR535848.1	=	NC_046648.1	0
Chromosome 17	LR535849.1	=	NC_046649.1	0
Chromosome 18	LR535850.1	=	NC_046650.1	0
Chromosome 19	LR535851.1	=	NC_046651.1	0
Chromosome 20	LR535852.1	=	NC_046652.1	0
Chromosome 21	LR535853.1	=	NC_046653.1	0
Chromosome 22	LR535854.1	=	NC_046654.1	0
Chromosome 23	LR535855.1	=	NC_046655.1	0
Chromosome 24	LR535856.1	=	NC_046656.1	0
unplaced	n/a	n/a	n/a	98

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	591,935,101	122	578,703,761	25,090,313	236
Chromosome 1	26,083,871	1	25,965,418	26,083,871	8
Chromosome 2	11,449,207	1	11,270,311	11,449,207	5
Chromosome 3	28,130,073	1	27,964,308	28,130,073	7
Chromosome 4	27,812,077	1	26,992,958	27,812,077	13
Chromosome 5	28,762,963	1	27,809,896	28,762,963	13
Chromosome 6	25,090,313	1	25,078,871	25,090,313	3
Chromosome 7	26,713,207	1	25,722,683	26,713,207	8
Chromosome 8	23,202,127	1	22,434,073	23,202,127	8
Chromosome 9	25,822,229	1	25,714,002	25,822,229	3
Chromosome 10	29,124,071	1	27,853,639	29,124,071	19
Chromosome 11	22,941,789	1	22,672,783	22,941,789	7
Chromosome 12	21,043,631	1	21,043,569	21,043,631	1
Chromosome 13	27,498,257	1	27,145,708	27,498,257	9
Chromosome 14	24,807,201	1	24,246,109	24,807,201	8
Chromosome 15	24,075,063	1	23,920,007	24,075,063	3
Chromosome 16	25,861,585	1	25,516,736	25,861,585	7
Chromosome 17	24,949,636	1	24,711,062	24,949,636	13
Chromosome 18	19,675,934	1	18,794,845	19,675,934	10
Chromosome 19	19,920,769	1	19,452,388	19,920,769	7
Chromosome 20	20,063,462	1	19,464,859	20,063,462	10
Chromosome 21	28,732,325	1	28,202,200	28,732,325	12
Chromosome 22	23,286,013	1	22,513,843	23,286,013	6
Chromosome 23	16,453,789	1	16,266,331	16,453,789	4
Chromosome 24	21,328,623	1	20,237,678	21,328,623	10
unplaced	19,106,886	98	17,709,484	1,057,340	42

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fMasArm1.2

See Genome Information for Mastacembelus armatus

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear