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IMG-taxon 2588253509 annotated assembly

Organism name:
Anaerosporobacter mobilis DSM 15930 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 15930
BioSample:
SAMN02746066
BioProject:
PRJEB18405
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/12/03
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900142955.1 (latest)
RefSeq assembly accession:
GCF_900142955.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FRCP01
Genome coverage:
409x

IDs: 910461 [UID] 3778548 [GenBank] 3842468 [RefSeq]

See Genome Information for Anaerosporobacter mobilis

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length5,217,774
Total ungapped length5,216,759
Gaps between scaffolds0
Number of scaffolds45
Scaffold N50261,302
Scaffold L507
Number of contigs48
Contig N50203,194
Contig L509
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)45

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,217,774455,216,759261,30230

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Anaerosporobacter mobilis DSM 15930Anaerosporobacter mobilis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900113155.1Enterocloster clostridioformistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type96.740.960.91

ANI result

Taxonomy check statusBest match statusComment
OKlow-coverageAssembly is the type-strain, no match is expected