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IMG-taxon 2585428077 annotated assembly

Organism name:
Caloranaerobacter azorensis DSM 13643 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 13643
BioSample:
SAMN02745135
BioProject:
PRJEB18251
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/12/03
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900129995.1 (latest)
RefSeq assembly accession:
GCF_900129995.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FQXO01
Genome coverage:
371x

IDs: 910501 [UID] 3778628 [GenBank] 3841728 [RefSeq]

See Genome Information for Caloranaerobacter azorensis

Pathogen Detection Resources

There are 7 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,461,935
Total ungapped length2,459,474
Gaps between scaffolds0
Number of scaffolds156
Scaffold N5027,765
Scaffold L5026
Number of contigs158
Contig N5027,765
Contig L5026
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)156

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,461,9351562,459,47427,76520

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Caloranaerobacter azorensis DSM 13643Caloranaerobacter azorensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001730685.1Caloranaerobacter ferrireducenstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type88.5664.8065.00

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected