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IMG-taxon 2609459740 annotated assembly

Organism name:
Polaromonas sp. OV174 (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: OV174
BioSample:
SAMN05216344
BioProject:
PRJEB17170
Submitter:
DOE - JOINT GENOME INSTITUTE
Date:
2016/11/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_900112285.1 (latest)
RefSeq assembly accession:
GCF_900112285.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FOKZ01
Genome coverage:
284x

IDs: 882861 [UID] 3705468 [GenBank] 4882488 [RefSeq]

See Genome Information for Polaromonas sp. OV174

History (Show revision history)

Comment

Global statistics

Total sequence length4,531,508
Total ungapped length4,531,508
Number of contigs61
Contig N50161,734
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)61

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,531,508614,531,508161,73400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Polaromonas sp. OV174Polaromonas sp. OV174

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001598235.1Polaromonas jejuensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type84.8644.4939.26

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna