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ASM3844099v1

Organism name:
Campylobacter jejuni (e-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: JZ06
BioSample:
SAMN34134748
BioProject:
PRJNA954171
Submitter:
Institute of Animal Husbandry and Veterinary, Hubei Academy of Agricultural Sciences
Date:
2024/04/23
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_038440995.1 (latest)
RefSeq assembly accession:
GCF_038440995.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JBCGBW01
Assembly method:
SOAPdenovo v. 2.04
Expected final version:
yes
Genome coverage:
100x
Sequencing technology:
Illumina NovaSeq

IDs: 22439381 [UID] 56738238 [GenBank] 56835768 [RefSeq]

See Genome Information for Campylobacter jejuni

There are 79963 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,662,080
Total ungapped length1,662,080
Number of contigs13
Contig N50254,571
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)13

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,662,080131,662,080254,57100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Campylobacter jejuniCampylobacter jejuni

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001457695.1Campylobacter jejunitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001457695.1Campylobacter jejunitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.5892.5387.06
Best-match type97.5892.5387.06

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna