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ASM3086400v1

Organism name:: Achromobacter seleniivolatilans (b-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: R39
BioSample:: SAMN36965621
BioProject:: PRJNA1004897
Submitter:: China Agricultural University
Date:: 2023/08/23
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_030864005.1 (latest)
RefSeq assembly accession:: GCF_030864005.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: SMRT LINK v. 5.0.1
Expected final version:: yes
Genome coverage:: 294.0x
Sequencing technology:: PacBio

IDs: 18196581 [UID] 46506178 [GenBank] 46659808 [RefSeq]

See Genome Information for Achromobacter seleniivolatilans

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_030864005.1	=	GCF_030864005.1	ASM3086400v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Bacteria and source DNA available from China Agricultural University
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::08/23/2023 16:55:37
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::6,197
CDSs (total)::6,122
Genes (coding)::6,096
CDSs (with protein)::6,096
Genes (RNA)::75
rRNAs::5, 4, 4 (5S, 16S, 23S)
complete rRNAs::5, 4, 4 (5S, 16S, 23S)
tRNAs::58
ncRNAs::4
Pseudo Genes (total)::26
CDSs (without protein)::26
Pseudo Genes (ambiguous residues)::0 of 26
Pseudo Genes (frameshifted)::8 of 26
Pseudo Genes (incomplete)::22 of 26
Pseudo Genes (internal stop)::2 of 26
Pseudo Genes (multiple problems)::5 of 26
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	6,862,680
Total ungapped length	6,862,680
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP132976.1	=	NZ_CP132976.1
Plasmid unnamed	CP132977.1	=	NZ_CP132977.1

Molecule	Total Length
All	6,862,680
Chromosome	6,676,907
Plasmid unnamed	185,773

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	86.15	56.44	55.17

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ASM3086400v1

See Genome Information for Achromobacter seleniivolatilans

Pathogen Detection Resources

History (Show revision history)

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Genome-Annotation-Data

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