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Source database (GenBank or RefSeq) File type

ASM3024719v1

Organism name:: Topomyia yanbarensis (mosquitos)
Infraspecific name:: Strain: Yona2022
Sex:: male
BioSample:: SAMN34999503
BioProject:: PRJNA942918
Submitter:: Rockefeller University
Date:: 2023/06/12
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_030247195.1 (latest)
RefSeq assembly accession:: GCF_030247195.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JASDBJ01
Assembly method:: Hifiasm v. APRIL-2023
Expected final version:: yes
Genome coverage:: 48.0x
Sequencing technology:: PacBio Hifi

IDs: 16856551 [UID] 43299418 [GenBank] 44999138 [RefSeq]

See Genome Information for Topomyia yanbarensis

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Comment

Global statistics

Total sequence length	1,168,159,140
Total ungapped length	1,167,290,140
Gaps between scaffolds	0
Number of scaffolds	1,046
Scaffold N50	428,584,394
Scaffold L50	2
Number of contigs	2,784
Contig N50	2,783,074
Contig L50	102
Total number of chromosomes and plasmids	3
Number of component sequences (WGS or clone)	1,046

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Assembly Information

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ASM3024719v1 - Genome - Assembly - NCBI
ASM3024719v1 - Genome - Assembly - NCBI

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Assembly Definition
Assembly Statistics

Global assembly definition

Download the full sequence report

Assembly Unit: Primary Assembly (GCF_030247405.1)

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM058068.1	=	NC_080670.1	0
Chromosome 2	CM058069.1	=	NC_080671.1	0
Chromosome 3	CM058070.1	=	NC_080672.1	0
unplaced	n/a	n/a	n/a	1,043

Assembly statistics

Primary Assembly

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	1,168,159,140	1,046	1,167,290,140	428,584,394	1,738	0
Chromosome 1	217,786,545	1	217,506,545	217,786,545	560	0
Chromosome 2	470,223,097	1	469,912,097	470,223,097	622	0
Chromosome 3	428,584,394	1	428,367,894	428,584,394	433	0
unplaced	51,565,104	1,043	51,503,604	109,106	123	0