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ASM1992520v1

Organism name:
Metopolophium dirhodum (rose-grain aphid)
Isolate:
CAU
BioSample:
SAMN20525404
BioProject:
PRJNA751716
Submitter:
China Agricultural University
Date:
2021/09/14
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_019925205.1 (latest)
RefSeq assembly accession:
GCF_019925205.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JAIOUA01
Assembly method:
SOAPdenovo v. 1.0
Expected final version:
yes
Genome coverage:
85.31x
Sequencing technology:
PacBio Sequel; Illumina NovaSeq; Complete Genomics

IDs: 10893791 [UID] 28835958 [GenBank] 49837768 [RefSeq]

See Genome Information for Metopolophium dirhodum

History (Show revision history)

Comment

Global statistics

Total sequence length480,811,620
Total ungapped length480,691,620
Gaps between scaffolds0
Number of scaffolds67
Scaffold N5041,762,923
Scaffold L503
Number of contigs307
Contig N507,032,305
Contig L5020
Total number of chromosomes and plasmids9
Number of component sequences (WGS or clone)67

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_019925235.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM034316.1=NC_083560.10
Chromosome 2CM034317.1=NC_083561.10
Chromosome 3CM034318.1=NC_083562.10
Chromosome 4CM034319.1=NC_083563.10
Chromosome 5CM034320.1=NC_083564.10
Chromosome 6CM034321.1=NC_083565.10
Chromosome 7CM034322.1=NC_083566.10
Chromosome 8CM034323.1=NC_083567.10
Chromosome 9CM034324.1=NC_083568.10
unplacedn/an/an/a58

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All480,811,62067480,691,62041,762,9232400
Chromosome 1160,037,0491159,955,549160,037,0491630
Chromosome 244,416,729144,410,72944,416,729120
Chromosome 341,762,923141,757,92341,762,923100
Chromosome 440,071,662140,067,66240,071,66280
Chromosome 539,359,500139,350,00039,359,500190
Chromosome 639,321,500139,315,00039,321,500130
Chromosome 738,521,574138,519,57438,521,57440
Chromosome 836,722,967136,720,96736,722,96740
Chromosome 933,431,937133,428,93733,431,93760
unplaced7,165,779587,165,279458,64710