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Source database (GenBank or RefSeq) File type

ASM1855537v3

Organism name:

Anguilla rostrata (American eel)

Isolate:

EN2019

Sex:

female

BioSample:

SAMN18538529

BioProject:

PRJNA718538

Submitter:

Laval University

Date:

2024/03/04

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_018555375.3 (latest)

RefSeq assembly accession:

GCF_018555375.3 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAGKSO02

Assembly method:

wtdbg2 v. 2.5

Expected final version:

yes

Reference guided assembly:

GCA_018555375.2

Genome coverage:

42.0x

Sequencing technology:

PacBio Sequel

IDs: 21623271 [UID] 54445048 [GenBank] 55782828 [RefSeq]

See Genome Information for Anguilla rostrata

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_018555375.3	≠	GCF_018555375.3	ASM1855537v3	Chromosome	Latest GenBank, Latest RefSeq
GCA_018555375.2	n/a	n/a	ASM1855537v1.1	Chromosome	Replaced GenBank
GCA_018555375.1	n/a	n/a	ASM1855537v1	Chromosome	Replaced GenBank

Comment

Global statistics

Total sequence length	976,090,453
Total ungapped length	975,996,080
Gaps between scaffolds	0
Number of scaffolds	967
Scaffold N50	56,672,075
Scaffold L50	8
Number of contigs	1,929
Contig N50	5,074,093
Contig L50	50
Total number of chromosomes and plasmids	19
Number of component sequences (WGS or clone)	967

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM031781.2	=	NC_057933.1	0
Chromosome 2	CM031782.2	=	NC_057934.1	0
Chromosome 3	CM031783.2	=	NC_057935.1	0
Chromosome 4	CM031784.2	=	NC_057936.1	0
Chromosome 5	CM031785.2	=	NC_057937.1	0
Chromosome 6	CM031786.2	=	NC_057938.1	0
Chromosome 7	CM031787.2	=	NC_057939.1	0
Chromosome 8	CM031788.2	=	NC_057940.1	0
Chromosome 9	CM031789.2	=	NC_057941.1	0
Chromosome 10	CM031790.2	=	NC_057942.1	0
Chromosome 11	CM031791.2	=	NC_057943.1	0
Chromosome 12	CM031792.2	=	NC_057944.1	0
Chromosome 13	CM031793.2	=	NC_057945.1	0
Chromosome 14	CM031794.2	=	NC_057946.1	0
Chromosome 15	CM031795.2	=	NC_057947.1	0
Chromosome 16	CM031796.2	=	NC_057948.1	0
Chromosome 17	CM031797.2	=	NC_057949.1	0
Chromosome 18	CM031798.2	=	NC_057950.1	0
Chromosome 19	CM031799.2	=	NC_057951.1	0
unplaced	n/a	n/a	n/a	948

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	976,090,453	967	975,996,080	56,672,075	962
Chromosome 1	85,926,328	1	85,916,871	85,926,328	98
Chromosome 2	74,291,849	1	74,284,499	74,291,849	75
Chromosome 3	73,680,781	1	73,677,539	73,680,781	35
Chromosome 4	67,792,086	1	67,788,336	67,792,086	39
Chromosome 5	64,525,361	1	64,520,930	64,525,361	47
Chromosome 6	57,757,454	1	57,753,154	57,757,454	45
Chromosome 7	56,672,075	1	56,666,379	56,672,075	60
Chromosome 8	57,408,470	1	57,403,204	57,408,470	53
Chromosome 9	54,638,277	1	54,636,413	54,638,277	16
Chromosome 10	44,911,171	1	44,908,802	44,911,171	24
Chromosome 11	43,378,468	1	43,375,084	43,378,468	33
Chromosome 12	41,684,247	1	41,677,688	41,684,247	65
Chromosome 13	42,194,640	1	42,190,028	42,194,640	46
Chromosome 14	41,243,590	1	41,240,282	41,243,590	34
Chromosome 15	36,957,926	1	36,954,827	36,957,926	33
Chromosome 16	37,719,156	1	37,711,244	37,719,156	80
Chromosome 17	30,844,102	1	30,840,421	30,844,102	39
Chromosome 18	31,544,258	1	31,542,228	31,544,258	18
Chromosome 19	16,104,911	1	16,093,346	16,104,911	117
unplaced	16,815,303	948	16,814,805	24,679	5

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ASM1855537v3

See Genome Information for Anguilla rostrata

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

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