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NemWhi1

Organism name:
Nematolebias whitei (Rio pearlfish)
Isolate:
Nwh7
Sex:
female
BioSample:
SAMN12588121
BioProject:
PRJNA560526
Submitter:
Michigan State University
Date:
2020/10/22
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_014905685.1 (replaced)
RefSeq assembly accession:
GCF_014905685.1 (replaced)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: 1 unlocalized scaffold on chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAAMPK01
Assembly method:
SuperNova, Chicago, HiC v. April 2020
Expected final version:
yes
Genome coverage:
53.63x
Sequencing technology:
Illumina

IDs: 8257101 [UID] 22545808 [GenBank] 23185768 [RefSeq]

See Genome Information for Nematolebias whitei

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length1,218,316,901
Total ungapped length1,120,653,511
Gaps between scaffolds0
Number of scaffolds18,998
Scaffold N5049,984,095
Scaffold L5011
Number of contigs119,519
Contig N5019,984
Contig L5015,690
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)18,998

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,218,316,90118,9981,120,653,51149,984,095100,5210