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ASM671502v1

Organism name:
Serratia fonticola (enterobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: 119RB
BioSample:
SAMN12024778
BioProject:
PRJNA546914
Submitter:
DOE Joint Genome Institute
Date:
2019/07/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_006715025.1 (latest)
RefSeq assembly accession:
GCF_006715025.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
VFMK01
Assembly method:
HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
Expected final version:
no
Genome coverage:
125.0x
Sequencing technology:
PacBio

IDs: 3676761 [UID] 11777808 [GenBank] 11979998 [RefSeq]

See Genome Information for Serratia fonticola

Pathogen Detection Resources

There are 83 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,692,513
Total ungapped length5,692,513
Number of contigs2
Contig N505,616,596
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,692,51325,692,5135,616,59600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Serratia fonticolaSerratia fonticola

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001006005.1Serratia fonticolatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001006005.1Serratia fonticolatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type86.0056.6353.72
Best-match type86.0056.6353.72

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-matchna