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ASM671500v1

Organism name:
Serratia marcescens (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 106R
BioSample:
SAMN12025734
BioProject:
PRJNA546915
Submitter:
DOE Joint Genome Institute
Date:
2019/07/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_006715005.1 (latest)
RefSeq assembly accession:
GCF_006715005.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
VFMJ01
Assembly method:
HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
Expected final version:
no
Genome coverage:
125.0x
Sequencing technology:
PacBio

IDs: 3676751 [UID] 11777788 [GenBank] 11978918 [RefSeq]

See Genome Information for Serratia marcescens

There are 2687 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length5,568,607
Total ungapped length5,568,607
Number of contigs2
Contig N505,487,490
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,568,60725,568,6075,487,49000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Serratia marcescensSerratia marcescens

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_003957875.1Serratia marcescens subsp. marcescens ATCC 13880type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003957875.1Serratia marcescenstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type95.3279.3387.58
Best-match type95.3279.3387.58

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna