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Source database (GenBank or RefSeq) File type

ASM429651v1

Organism name:: endosymbiont of Pachyrhynchus infernalis (g-proteobacteria)
Taxonomy check:: Inconclusive
Isolate:: NARPIN1
BioSample:: SAMD00080338
BioProject:: PRJDB5646
Submitter:: The Open University of Japan
Date:: 2017/10/21
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_004296515.1 (latest)
RefSeq assembly accession:: GCF_004296515.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: Velvet assembler v. 1.2.07
Genome coverage:: 380X
Sequencing technology:: Hiseq2000

IDs: 2318161 [UID] 8645888 [GenBank] 8655688 [RefSeq]

See Genome Information for endosymbiont of Pachyrhynchus infernalis

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_004296515.1	=	GCF_004296515.1	ASM429651v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Name::GCF_004296515.1-RS_2024_03_31
Annotation Date::03/31/2024 09:02:21
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::253
CDSs (total)::213
Genes (coding)::211
CDSs (with protein)::211
Genes (RNA)::40
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::32
ncRNAs::2
Pseudo Genes (total)::2
CDSs (without protein)::2
Pseudo Genes (ambiguous residues)::0 of 2
Pseudo Genes (frameshifted)::1 of 2
Pseudo Genes (incomplete)::1 of 2
Pseudo Genes (internal stop)::0 of 2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	226,299
Total ungapped length	226,299
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	82.55	1.94	0.68

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ASM429651v1

See Genome Information for endosymbiont of Pachyrhynchus infernalis

Pathogen Detection Resources

History (Show revision history)

Comment

Genome-Annotation-Data

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