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ASM360068v1

Organism name:
Achromobacter sp. B7 (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Culture-collection: CCUG:72081
Infraspecific name:
Strain: B7
BioSample:
SAMN09690389
BioProject:
PRJNA481776
Submitter:
Universidad Tecnica Federico Santa Maria
Date:
2018/09/27
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_003600685.1 (latest)
RefSeq assembly accession:
GCF_003600685.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
SPAdes v. 3.11.1
Expected final version:
yes
Genome coverage:
66.3
Sequencing technology:
Illumina HiSeq/Oxford Nanopore

IDs: 1996051 [UID] 7508228 [GenBank] 7532148 [RefSeq]

See Genome Information for Achromobacter sp. B7

History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::08/13/2023 04:15:44
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::5,627
CDSs (total)::5,553
Genes (coding)::5,516
CDSs (with protein)::5,516
Genes (RNA)::74
rRNAs::5, 4, 4 (5S, 16S, 23S)
complete rRNAs::5, 4, 4 (5S, 16S, 23S)
tRNAs::57
ncRNAs::4
Pseudo Genes (total)::37
CDSs (without protein)::37
Pseudo Genes (ambiguous residues)::0 of 37
Pseudo Genes (frameshifted)::6 of 37
Pseudo Genes (incomplete)::34 of 37
Pseudo Genes (internal stop)::2 of 37
Pseudo Genes (multiple problems)::5 of 37
##Genome-Annotation-Data-END##

Global statistics

Total sequence length6,236,552
Total ungapped length6,236,552
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_003600695.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP032084.1=NZ_CP032084.1

Assembly statistics

MoleculeTotal
Length
Chromosome 6,236,552

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Achromobacter sp. B7Achromobacter sp. B7

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_902859685.1Achromobacter piechaudiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type89.3877.2076.03

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna