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ASM301381v1

Organism name:
Cyanothece sp. BG0011 (cyanobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: BG0011
BioSample:
SAMN08470889
BioProject:
PRJNA433162
Submitter:
University of Florida
Date:
2018/03/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_003013815.1 (latest)
RefSeq assembly accession:
GCF_003013815.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
PRLH01
Assembly method:
HGAP v. 3
Expected final version:
yes
Genome coverage:
43.45x
Sequencing technology:
PacBio

IDs: 1646871 [UID] 6277718 [GenBank] 6385438 [RefSeq]

See Genome Information for Cyanothece sp. BG0011

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Bacteria and source DNA available from Edward Phlips, University of Florida.

Global statistics

Total sequence length5,603,048
Total ungapped length5,603,048
Number of contigs227
Contig N5040,896
Contig L5043
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)227

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,603,0482275,603,04840,89600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Cyanothece sp. BG0011Cyanothece sp. BG0011

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000017845.1Crocosphaera subtropicatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type88.8661.2862.88

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna